Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3293 |
Symbol | |
ID | 3972558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3646806 |
End bp | 3647750 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637926404 |
Product | exonuclease |
Protein accession | YP_533154 |
Protein GI | 90424784 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.413977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATAC TCGCAATTGA TTTTGAGACT GCAAATGAAA AGCGGTCGAG CCCATGTGCA TTGGGACTTG CTTGGATCGA ACGAGGTCAG ATTGTCCGTC GTGAGTATCG TCTGATAAAG CCGAAAGAGA TGCGTTTTGG TGTCTTTGAG GCGAAGGTGC ATGGCCTCTC GCCGTCAGAG GTCAAAGATG CACAAGAGTT TCCAGAAGTG ATTTCCGAGT TCTTATCCGA CATCCAAAGT GGTCTTTTAT TGGCCCACAA CGCTCAGTTC GATGTCGACG TGCTTTGCGC GACCCTCGCA CTTTACGGAA TTGCGATCCC TCGTTTTTCA TTTCTTTGCA GTCAGCGAGT TGCCAGTCGT GTCTGGTCTG ACGAGAAGTC GTTAAAGCTC TCAGCTCTCG GCGAGAAGCT GGGGATTTCC TTTCGGCACC ATCAGGCGGA TGAGGATGCG TTTGCCTGCG CTCATATCAT CCTGGCGGCT GCTGCCCATC TTGGCCTCTC TGAGGTCCTC GATATCGCAC CGCGTCTTGG GCTGCGGCTC GGCTTCGTCG ATGAGGTCGG AGTCGTCCTT TGTGAAGACC TTCCCTTATG CGACAAGAAT GAGGGGGTGC CCTCGTTTCG TTATGCGAAG CGTCTCTCAG CATTCGTGAA TGAAGCGAAG ACAACCATTC CTGAAAAAAG TCTTCATTTC GTTGTCAAAG GCAGCAGCGG AAATCAGTAC AATGTTTCGG AGATCAAGAA GGACGGTGTG TTCGACCTGA AGTGCGAATG CACTGGATGG AAGACGCGGC ATCGTTGTAG GCACGTCCAT GCCTTGCTCT ATGGAGAGGT GGATAGCTTG ATTTCGGACA ATGTTGATGA TGTTAAGAAG CTTCAGCTCA TCATCAAGGG TCTCGGAGGA GTTCCTCCGC TGTATGCGGA TTGGTTACCG CCACCGCAGC GATGA
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Protein sequence | MSILAIDFET ANEKRSSPCA LGLAWIERGQ IVRREYRLIK PKEMRFGVFE AKVHGLSPSE VKDAQEFPEV ISEFLSDIQS GLLLAHNAQF DVDVLCATLA LYGIAIPRFS FLCSQRVASR VWSDEKSLKL SALGEKLGIS FRHHQADEDA FACAHIILAA AAHLGLSEVL DIAPRLGLRL GFVDEVGVVL CEDLPLCDKN EGVPSFRYAK RLSAFVNEAK TTIPEKSLHF VVKGSSGNQY NVSEIKKDGV FDLKCECTGW KTRHRCRHVH ALLYGEVDSL ISDNVDDVKK LQLIIKGLGG VPPLYADWLP PPQR
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