Gene RPC_3283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3283 
Symbol 
ID3971739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3633574 
End bp3634494 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content63% 
IMG OID637926394 
ProductABC transporter related 
Protein accessionYP_533144 
Protein GI90424774 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.576419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCGA TCATCTCCAT TTCCCACCTG TCGAAGACCT ATGGCTCCGG CCTGAAGGCG 
CTCAACGACG TTTCGCTGGA TATCGACCGC GGCGAAATCT TCGCCCTGCT GGGGCCGAAC
GGCGCCGGCA AGACCACCCT GATCAGCATC ATCTGCGGCA TCGCCAATCC GAGCGCCGGC
CAGGTGCTGG TCGACGGTCA CGACAACGTC GCCGCCTACC GCGCAGCCCG GTCGATGATC
GGCCTGGTGC CGCAGGAATT GCACACCGAC GCCTTCGAGA CGGTGTGGGC GACGGTGAGC
TACAGCCGCG GGCTGTTCGG CAAGAAGGCC AACCCGGCCT ATATCGAAAA GGTGCTGCGC
GACCTGTCGC TGTGGGACCG CAAAGATTCC CGGATCATCA CGCTGTCCGG CGGCATGAAG
CGCCGGGTGA TGATTGCCAA AGCGCTGTCG CACGAGCCGC AGATCCTGTT CCTCGACGAG
CCGACCGCGG GCGTCGACGT CGAGCTGCGC AAGGGGATGT GGGAAGTGGT GCGGGCGCTG
CGCGCCACCG GCGTCACCAT CATCCTCACC ACGCATTACA TCGAAGAAGC CGAGGAGATG
GCCGACCGCA TCGGCGTCAT CAATAAGGGC GAGATCATTT TGGTCGAACA GAAGGCGGCG
CTGATGCAGA AGCTCGGCAA GAAACGGCTG AAGCTGCATC TGATCGGCAA GGTCGAGGCG
GTCCCGCCGC AGCTTGCGGA ATACAATCTG GCGCTGGCCG AAAACGGCAG CGAATTGATC
TACACCTATG ACAGCAAGTC GGAGCGCACC GGCATCACCG GCCTGCTCGC GGCGTTGCGC
GAGGCCGGCA TCCGCTTCCA CGATCTCGAC ACCACGCAGA GCTCGCTGGA AGATATTTTC
GTCAGCCTGG TGAGGGCATG A
 
Protein sequence
MPPIISISHL SKTYGSGLKA LNDVSLDIDR GEIFALLGPN GAGKTTLISI ICGIANPSAG 
QVLVDGHDNV AAYRAARSMI GLVPQELHTD AFETVWATVS YSRGLFGKKA NPAYIEKVLR
DLSLWDRKDS RIITLSGGMK RRVMIAKALS HEPQILFLDE PTAGVDVELR KGMWEVVRAL
RATGVTIILT THYIEEAEEM ADRIGVINKG EIILVEQKAA LMQKLGKKRL KLHLIGKVEA
VPPQLAEYNL ALAENGSELI YTYDSKSERT GITGLLAALR EAGIRFHDLD TTQSSLEDIF
VSLVRA