Gene RPC_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3199 
Symbol 
ID3971997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3540786 
End bp3541565 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID637926309 
Productenoyl-CoA hydratase 
Protein accessionYP_533060 
Protein GI90424690 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0460733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.284798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG ACAGCGTGAT CATCGAGAAG CGCGGCGCGG CGTTGTGGAT CACCATCAAC 
CGGCCCGACA AGCGCAACGC CATCAACGCC GGCGTGGTGG ACGGCATCGG CCGCGGCTAT
CGCCTCGCCC ATGACGACGC CGAAGTGCGC GCCCTCGTGC TGACCGGCGC CGGCGACAAG
GCGTTCTGCG CCGGCGCCGA TCTGCAGGCG ACCGGTGCTG CGTTCGCGGC GGATTTCTCC
AAGCCCAATG TCGACTACGC CGATCTGTTG CGGCTGTCGC AGAATGCCAC CAAACCGTCG
ATCGCGCGGG TCAACGGCGT CTGCATGGCG GGCGGCATGG GATTGTTGTG CATGACCGAC
CTGGCGGTCG CCGCCGACAC CGCGCTGTTC GGGCTGCCCG AGGTCAAGGT CGGGGTGTTT
CCGATGCAGG TGATGAGCCT GTTGCAGGAC ATCGCGCCGC GCCGGCTGAT CAACGAATGG
GCGTTGACCG GCGAGCCGTT CGACGCCCAG GCGGCGTTGG CGGCGGGGCT GTTGAACTAC
GCGGTGCCGG CGGCCGAGCT CGATGCCAAG GTCGACTGGC TGCTCGCGCG GCTCGCCGAC
AAATCACCGA CCGCGATCCG GCGCGGCAAA TACGCCATGC GGGCGATCGG CGCGATGTCG
TTCGACCAGG CGATCGCCTA CACCGAAAGC CAGATCGCGC TGTTGGCGAT GACCGAGGAC
GCCAAGGAGG GGCTCAAGGC GTTCGCCGAG AAGCGCAAGC CGGCCTGGCC GGGGCGGTGA
 
Protein sequence
MTDDSVIIEK RGAALWITIN RPDKRNAINA GVVDGIGRGY RLAHDDAEVR ALVLTGAGDK 
AFCAGADLQA TGAAFAADFS KPNVDYADLL RLSQNATKPS IARVNGVCMA GGMGLLCMTD
LAVAADTALF GLPEVKVGVF PMQVMSLLQD IAPRRLINEW ALTGEPFDAQ AALAAGLLNY
AVPAAELDAK VDWLLARLAD KSPTAIRRGK YAMRAIGAMS FDQAIAYTES QIALLAMTED
AKEGLKAFAE KRKPAWPGR