Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3130 |
Symbol | |
ID | 3972779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3475995 |
End bp | 3476549 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637926239 |
Product | hypothetical protein |
Protein accession | YP_532991 |
Protein GI | 90424621 |
COG category | [S] Function unknown |
COG ID | [COG5388] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0916882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCATC CAGCAAGCCA GGCGCTGTTC GCCTATTGGG ACGACAAGCG GGGCGGCGCG CGGGCTCCGG AGCGTCAGGC CTTCGAGCCG GCCGAGATCA GAGAATTGCT CGGCGACATC TTCGTCCTGT CGTACCAGCG CGCCGTCGAG TGCCGATTCC GGGTCGCCGG GACCCGGGTC TGCGCCCTGC TCGGCCGCGA CCTCAAAGGC GAGAGCTTCG CCGCACTGTT TGCCGCCGAA AGCCGCGGCG AGATCGAAGA CCTGCTGGGT TTGGTCGCCG AAGACGCGCT GACGGCCGTC GCCGGCCTCA GCGCCGCGAC CTCCGACGGC TCGGTCAGCC ATCTCGAATT GTTGCTGCTG CCGTTCAACG CCCGCGCCCA CAGCCCGCTG ACCATGACCG GGCTGTTGGC CCCGCTCGAT CTCGGCCACC GCAACCTCGG CGAATTCCGC CTGACCTCCT GGCGCACGCT GCGCCCGCCG CAACGACTCG GCCGGCGCTC GCTGCGCAAG TTCCGGGCGG CGCCCGGCTT GACAGTTTAC GAGGGGGTCA ACTGA
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Protein sequence | MKHPASQALF AYWDDKRGGA RAPERQAFEP AEIRELLGDI FVLSYQRAVE CRFRVAGTRV CALLGRDLKG ESFAALFAAE SRGEIEDLLG LVAEDALTAV AGLSAATSDG SVSHLELLLL PFNARAHSPL TMTGLLAPLD LGHRNLGEFR LTSWRTLRPP QRLGRRSLRK FRAAPGLTVY EGVN
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