Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3022 |
Symbol | |
ID | 3973629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3318379 |
End bp | 3319533 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637926133 |
Product | putative aliphatic amidase expression-regulating protein, AmiC |
Protein accession | YP_532886 |
Protein GI | 90424516 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.486671 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACGAA AGACGTATCG GATCGGCGTG ATGCTATCGA CGACGGGCTC CTACGGCGCC GTCGCGCGTT CGATGCTCAA TGGCGCGACG CTTGCTTTCC AAGAGATTGC CGCTGCGGGC GGGGCGCCGC TGCTGGAGCC GGTGATCGTC GATCCAGCCG GCGATCTGGC GCGCTACCGC GCGCTCAGCC TGGAACTGCT GTCGTCAGGA GTGCGCCACG TGGTCGGCTG CTATACATCG TCGAGCCGCA AGGAGGTGAT CCCGTGCTTC GAGAAGTGCG ATGGATTGCT ATGGTATCCA TCGCACTATG AAGGGTTCGA GAGTTCGGAC AACGTCATCT ACACCGGTGC AGCGCCGAAC CAGCACGTGT TGCCGCTGGT GGACTATCTC GTCGCGCGTG TCGGCAAGAC CGCGTTCTGT ATCGGCTCCA ATTACATTTG GGCTTGGGAG AACAACCGAA TCTTCCGGGA AGCGCTGATG GCGCGGGGCG GCAGCGTGAT CGCCGAACGC TATTTGCCGG TCGGCGACAC CGACGTCGAT CGCGTGGTCG AAGCGATTGT CGACCAGCGG CCGGATTTCG TCTTCAACAA TCTGATCGGC AGTAGCGCCT ATTCGTTCTT CCGCGCGCTG CGCCGCGCCT GTCGCGCCCG CGGCATCGAT CAGGTCGCTA CGATCCCGGT CGCTTCCTGC ACGCTGTCGG AGCCGGAGCT CGCCGAAATC GGCGAAGATG CAGTCGATGG CCATCTCTCC TCGAGCGTGT ACTTCTCCTC GGTCGGCGGC GTGGCGAATG CCGTCTTCCG TCGCGCCTAT GCCGCGGCGT TTCCGCAGGG GCCGGCCTCG TCGGCCGACG CCGAATCCTC CTATATCGCG GTCAAGCTGC TCGCGGCGGC GTTGCAGCAG GCCGGAACCG ACGAGGCCCG CGCTGTGCGC GCCGCGGTGG CCAATCAACG GTTGGCTGCG CCGCAGGGCG AGGTCCGTAT CGATCCGCAG ACCTATCATG CCTGGTTGAC GCCGCGGATC GGCCGCTCGA CGGCCGACGG ACAGTTCGAC GTGCTGCTCG AAGCCCAGCA GCCGATTGCT CCCGATCCCT ATCTCGTCCA GACCTCGCCG CGGTTCGCGA CCGCGATGCG ATCTCCGCTA TTGAGGGTGG TGTAG
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Protein sequence | MLRKTYRIGV MLSTTGSYGA VARSMLNGAT LAFQEIAAAG GAPLLEPVIV DPAGDLARYR ALSLELLSSG VRHVVGCYTS SSRKEVIPCF EKCDGLLWYP SHYEGFESSD NVIYTGAAPN QHVLPLVDYL VARVGKTAFC IGSNYIWAWE NNRIFREALM ARGGSVIAER YLPVGDTDVD RVVEAIVDQR PDFVFNNLIG SSAYSFFRAL RRACRARGID QVATIPVASC TLSEPELAEI GEDAVDGHLS SSVYFSSVGG VANAVFRRAY AAAFPQGPAS SADAESSYIA VKLLAAALQQ AGTDEARAVR AAVANQRLAA PQGEVRIDPQ TYHAWLTPRI GRSTADGQFD VLLEAQQPIA PDPYLVQTSP RFATAMRSPL LRVV
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