| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2909 |
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| Symbol | |
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| ID | 3971937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3163520 |
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| End bp | 3164308 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926022 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_532776 |
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| Protein GI | 90424406 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.417434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.368798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGC GTCATCGATG GTATGCGATC TGTACGTTCG TCCTGCTTGC GCTGGCGATC
CTCCTGCCAA GGCCGGCGTT CGCCGAACTG CTGCCGCCCT CGACCCGATC CGATCGGCGC
GTCGCAACGG TCGATGCGCT GCAGCGAGCA AAAGCTGCCC CGGCCGACGC CGTTTCCAAT
ACAAAAGACG AAAGCAACGA CAAGACCGCG AAAGACCTGC CAGCTTCGCG GCCTGGCCTC
GGCGGCCATC TGAGCTATCG CGCCCTGATC GAAAAGGAGA CCGCGGGAAC GGGGCTTGCA
CCAGAGATCG CCGAAGCCGT GATGGCGGTG GAGAGCGGCT CCAACCCTGC TGCGATCGGC
GGTGTTGGCG AAATCGGCCT GATGCAGATC TTGCCGTCCA CCGCCCGCAT GCTCGGCTTT
GCCGGAAGCA ATGCCGATCT CGCGGTGCCT AGCACCAACA TTCATTACGG CGTGACCTAT
CTTGCCCGGG CTTGGCGGCT GGCCGGCGGC GATCTCTGTA CCGCCGTGAT GAAATACCGC
GCCGGTCACG GCGAGACGCG CTTTTCGTTT CTGTCGGTCA ATTATTGTCT CGCAGTGCGC
AGCAAACTCG CTGCCCGTGG CTTTCGGGTG ACGGGAATTG TTCCGGTCGC GACTTTCGGC
GCGGCTGCGG CTGGAAGCAC CGGTTGCAAA CGCAAGTGCC TGGGGGAATC TCGTGTCGGC
CGCGTTGATC TTGCCGCACT CAACACCCGG CTCGGCGCGC TCGTGATGCA GGCGAGGGCG
GCGCGGTGA
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| Protein sequence | MSKRHRWYAI CTFVLLALAI LLPRPAFAEL LPPSTRSDRR VATVDALQRA KAAPADAVSN
TKDESNDKTA KDLPASRPGL GGHLSYRALI EKETAGTGLA PEIAEAVMAV ESGSNPAAIG
GVGEIGLMQI LPSTARMLGF AGSNADLAVP STNIHYGVTY LARAWRLAGG DLCTAVMKYR
AGHGETRFSF LSVNYCLAVR SKLAARGFRV TGIVPVATFG AAAAGSTGCK RKCLGESRVG
RVDLAALNTR LGALVMQARA AR
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