| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2905 |
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| Symbol | |
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| ID | 3971933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3160623 |
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| End bp | 3161165 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926018 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_532772 |
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| Protein GI | 90424402 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0305707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.216525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCGGATA CCAATCGGCT CAAGCTGCGC CGGCAACTTG TCGAAAATTA CGATAAACTG
ATCAAGCACC TGACGCGGCG CTTGGGATCG TCGGATTTCG CCTATGAAGC CCTGCACGAG
ACCTTCGTGC GGCTCGACGG CGTCCCGGAG ACCACCGAGG TCCGCAGTCC TGCCGACTAT
ATTTTCCGCA CGGCCATCAA TATCGCCAAG AACCGCCGCA AGGCGCAGAG CTATCGCGTC
TCGCCGTTCG AGATCGAGGC GCTGATCGAT GTGACCGACG AGATGCCGGA TCCGGCAAGA
ACCGCGGAGG CGCGCTCGGA TTTTCAGGCC TTTGAGCGGG CACTTCTGCA GCTTCCCGAG
CGACCGCGTC ACGTCCTCCG TCTGATGTCG CTGGAGGGCA AGACCGCCCA AGAGACCGCC
GAGATCCTGG AGGTCAGCGT GCGCACCATC GCTGCCGACT ATCAGCTAGC GCTACAACAT
TGCGCCCATA GCCTCAACCG GCCGCTCCTT GCCCGCCTTG GAGGTCCACG TCCGCGGGTG
TGA
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| Protein sequence | MADTNRLKLR RQLVENYDKL IKHLTRRLGS SDFAYEALHE TFVRLDGVPE TTEVRSPADY
IFRTAINIAK NRRKAQSYRV SPFEIEALID VTDEMPDPAR TAEARSDFQA FERALLQLPE
RPRHVLRLMS LEGKTAQETA EILEVSVRTI AADYQLALQH CAHSLNRPLL ARLGGPRPRV
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