Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2891 |
Symbol | |
ID | 3970041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3145365 |
End bp | 3146885 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637926003 |
Product | putative Omp2b porin |
Protein accession | YP_532758 |
Protein GI | 90424388 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0130237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0599133 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGG TTAAGAGCCT TATTCTCGGC TCAGCGGCGG CCCTGGTCGC GATTAGTGGA GCCCAGGCCG CCGATCTTCC GTTGAAGGCC AAAGCGGTCG AATACGTGAA GGTCTGCTCG CTGTACGGCG CAGGTTTCTA TTACATCCCC GGCACTGACA CCTGCATCAA GCTCGGCGGC TATCTGCGCG CCGACCTCAC GCTCAACGGT TCAGCCGGCT TCGACGCGCC CGCCTGGAAC GGCAATTCGG GTCAGCAGAA TCGTCTGAAG AACGACTTCA TCTTCCGCTC CCGCCAGGAC ATCAACATCG ACACCCGCAC CGCGACCGAA TACGGCGTGG TCCGCACCTA CTTCGATGCG ATCTTCCAGT GGACGACCGG CACCGATACG ATCGCCGGTG GCTCGCTCGG CGTGTACTAC GCCTTCGTCC AGTTCGCCGG CTTCACCTTC GGTAAGGCGG TGTCGCAGTT CGACGCGCCG TGGTCGGGCT ATCCCGGCAA CAACACGTCC TACCTGCTCG GCGGCTACGA CGACGTCACC GGCATCAACC AGATCTCCTA CACCGCGCAG TTCGGCAATG GCGTGTCGGC CGCGATCTCG TTGGAAGATC CCTACGCCTA TTTGCAGTCG GCGCTGTATA ACACCTCTTT TGCGGCGTCC GGTACGACCG GATTCGCCGG TGGTGTGGCC GGAGCCGCCA CGTTCTACGG GGCAAACTCC TACGCCGGCA CTCAGATTCC CGACATCGTC GGTCAATTGC GTGTCGACCA GGCCTGGGGG TTGTTCCAAC TCTCGGCGGC GGCGCACCAG ATTCGCGCCA GTTACTACAA TCCGGGTGAT GAAACCACCG GTCACCCCGG CGACAAGTGG GGCTACGCCG TGCAGGCCGC CCTGTCGATC AAGAACATTC CGACCGGTCC CGGCGACAGC ATCAACGTGA GCGCCGGCTA TGCGGATGGG GCCAGCCGCT ATTTGATCGG CGGCGTGACG GGCAACAGCT TCGCAATGTT CGGCGGCACC GGAGCTCCCG GCGCCTATCA GAGCTTAGCC TTCGCGGCGT CGTCGGACGG CGTGTTCGCC GGCACCTCGT CGGCCAACGG CACCGGCATC CAGACCACGA CGGGCTGGGC GCTTCGTGGC GCGTTCAACC ACAACTGGAG CCCGTACTGG TCGTCCTCGC TGTTCGGTTC GTACACCGCG ATCAACTACA ACGGCACCGC GACCGCTCTG ATCTGCGGTG GCACTGGCTT CGGTCTGTTG AATATCACAG GTTACACTCC GGTCGCGGGC TCCGGCTATA GCTGCAACCC CGACTTCAAC ATCGCGCAGG TGGGTCTCGT CACCCGCTGG ACCCCGGTCA GGAACCTGAC GCTGTCCGGC GAAGTTCTGT ACACCAATCT CGACCAGAAC TTTTCCGGTG TCGTTGCCCT TCCTGCTGTC GGAACCAAGC CGGCTCGGAG CTACGAGTTG AAGGACCAGG ACACCTGGAC CGGCAACCTG CGCATTCAGC GTAACTTCTG A
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Protein sequence | MKMVKSLILG SAAALVAISG AQAADLPLKA KAVEYVKVCS LYGAGFYYIP GTDTCIKLGG YLRADLTLNG SAGFDAPAWN GNSGQQNRLK NDFIFRSRQD INIDTRTATE YGVVRTYFDA IFQWTTGTDT IAGGSLGVYY AFVQFAGFTF GKAVSQFDAP WSGYPGNNTS YLLGGYDDVT GINQISYTAQ FGNGVSAAIS LEDPYAYLQS ALYNTSFAAS GTTGFAGGVA GAATFYGANS YAGTQIPDIV GQLRVDQAWG LFQLSAAAHQ IRASYYNPGD ETTGHPGDKW GYAVQAALSI KNIPTGPGDS INVSAGYADG ASRYLIGGVT GNSFAMFGGT GAPGAYQSLA FAASSDGVFA GTSSANGTGI QTTTGWALRG AFNHNWSPYW SSSLFGSYTA INYNGTATAL ICGGTGFGLL NITGYTPVAG SGYSCNPDFN IAQVGLVTRW TPVRNLTLSG EVLYTNLDQN FSGVVALPAV GTKPARSYEL KDQDTWTGNL RIQRNF
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