Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2741 |
Symbol | |
ID | 3970158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2976684 |
End bp | 2977979 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637925851 |
Product | general substrate transporter |
Protein accession | YP_532608 |
Protein GI | 90424238 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.879641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.395533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCAA CAAATTTCGG GCCGGCGGGC ACCGCCGCCG GGCGCGGCAA ACCGTTGAAT TCTCCTGCGC AGGTATTGCT GGCGAGCCTG ATCGGCACCA CCGTCGAGTT CTTCGATTTC TACGTCTACG CCACCGCGGC CGTGCTGGTG TTTCCGACGC TGTTCTTCCC CAACAGCGAT CCGATGACCG CGCTGTTGGC GTCGTTCGCC ACCTTCTCGA TCGCGTTTTT TGCGCGTCCG TTCGGCGCCA TCATCTTCGG CCATTTCGGC GACCGCGTCG GACGCAAAAC CACCTTGGTG GCAGCCTTGC TGACGATGGG AATTTCCACC GTGGTGATCG GGTTGCTGCC GACCTATCAC CAGATCGGCG TGATTGCGCC GCTGCTGCTG GCGCTATGCC GGTTCGGCCA GGGCTTCGGG CTCGGCGGCG AATGGGGCGG CGCGGTGCTG CTGGCCACCG AGAACGCGCC GGAGGGCAAG CGCAGCTGGT ACGGAATGTT TCCGCAGCTC GGCGCGCCGG TCGGGCTGTT CCTCGCCTCC GGCGTGTTCT GGTTGCTGCT CCACTTCATG TCGCAGGAGG CGCTGCTGGC CTGGGGCTGG CGCATCCCCT TCATCGTCTC GATCGTGCTG ATCGCGATCG GTCTGTGGGT CCGTCTCTCG ATCACCGAAA CCCCGGAATT TCAGCAGGCC ATCGACAAGG CCGAGCGGGT CGCGGTGCCG GTGCTGGAGG TCTTCCGGCA TCACAAGCTC AGCCTGCTGA TCGGCACCTT CATGGCGCTG GTGACGTTCG TGGCGTTCTA CATCTGCACG GCCTATCTAT TGTCCTACAA CGTCAAGGTC GCCGGGGTGT CGTTTCGCGA CGCGCTGCTG GTGCAGATCT ACGGCTCGAT GCTGTTCGGC ATCAGCACGA TCGCGGCCGG CAAGCTCGGC GACCGCTTCG GACGCCGCAC CTTGCTGCTC GGAAGCACCA TCGTGCTCGG GCTGTTTTCG TTCGCGCTGG CGCCGCTGCT CGGCGCCGGG CTGGTCGGCA TCTACGCTTT CACCACCGTC GGCATGCTGC TGTTCGGGAT GAATTACGGC GTGATCGGCG CCGCCTTGGC GGCCCCGTTC CCGACCCGGG TGCGCTACAC CGGGTCGTCG ATCACCTTCA ACATGGCCGG CATCTTCGGC GCGTCGCTGG CGCCCTATAT CGCCACCTGG CTGCAGGCCA ATTACGGCAT GAGCTATGTC GGCTACTATC AGTTGGCGGC CGCGCTGGTC TCGCTGCTGT GCATCCTGGC CTCGCGCAAG ATCTGA
|
Protein sequence | MDATNFGPAG TAAGRGKPLN SPAQVLLASL IGTTVEFFDF YVYATAAVLV FPTLFFPNSD PMTALLASFA TFSIAFFARP FGAIIFGHFG DRVGRKTTLV AALLTMGIST VVIGLLPTYH QIGVIAPLLL ALCRFGQGFG LGGEWGGAVL LATENAPEGK RSWYGMFPQL GAPVGLFLAS GVFWLLLHFM SQEALLAWGW RIPFIVSIVL IAIGLWVRLS ITETPEFQQA IDKAERVAVP VLEVFRHHKL SLLIGTFMAL VTFVAFYICT AYLLSYNVKV AGVSFRDALL VQIYGSMLFG ISTIAAGKLG DRFGRRTLLL GSTIVLGLFS FALAPLLGAG LVGIYAFTTV GMLLFGMNYG VIGAALAAPF PTRVRYTGSS ITFNMAGIFG ASLAPYIATW LQANYGMSYV GYYQLAAALV SLLCILASRK I
|
| |