Gene RPC_2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2721 
Symbol 
ID3970274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2953021 
End bp2953764 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content66% 
IMG OID637925831 
ProductIclR family transcriptional regulator 
Protein accessionYP_532588 
Protein GI90424218 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.276601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC AGACCGTTAA GAAGCCACCC GTACTCAAGG GCGTATCGGC CGCCGAACGC 
GCATTGGCGG TTTTGACCGC GTTCCGCCGG GGCGACGGCG CCTTGAGCCT CGCCGAGTTG
GCCGAGCGGA CCGGTCTGGT CAAGAGCACG ATCCTGCGGC TTGCATTGTC GCTGCAGCGA
TATCGGCTAA TCGCACGCCT TCCCGACGGC AGCTACCGGC TTGATGCGGA GACCTTGCGC
CTCGGGACAG CCTATCAGCA GGCGTTTCGT CTGTCCGACC ATGTCATGCC CGTGCTCGAA
CAGCTCGCCG CGAAGACCGG AGAAACGACG TCCTTCTATG TTCGGAACGG CGACGAGCGG
CTGTGTCTGT TTCGGGTGGA GACCACCAAC CGGATCCGCA TGGCCGTGCA GCCGGGCGAT
ACCCGTCCGA TGGACAAGTC CGCCATTGCG CAGACGCTGC GCCGATACGA ATCCGGGCCG
CCTGGACCTG ACGACGAGCT GCCGCTGTTC ACTTCGGGCG TGACGGATCC TCATGCGGCC
GCGCTCGCCA TGCCCGTGTT CGGCATCGGT GAATCGCTGG TCGGCGCGCT GGCCATCTCC
GGGCCTATCA GCCGGCTTAC CACGGCGCGG GCGGAGCAGG CCAAGGCACC ACTGGTCGAG
GCTGCCCACA AGCTCACAAT GGCCTGCGGG GGCACCGTGT CATCTGCAGA CGCAAAGCGC
AGCCGGCGAA AGACCAACGC GTAG
 
Protein sequence
MAKQTVKKPP VLKGVSAAER ALAVLTAFRR GDGALSLAEL AERTGLVKST ILRLALSLQR 
YRLIARLPDG SYRLDAETLR LGTAYQQAFR LSDHVMPVLE QLAAKTGETT SFYVRNGDER
LCLFRVETTN RIRMAVQPGD TRPMDKSAIA QTLRRYESGP PGPDDELPLF TSGVTDPHAA
ALAMPVFGIG ESLVGALAIS GPISRLTTAR AEQAKAPLVE AAHKLTMACG GTVSSADAKR
SRRKTNA