| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2718 |
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| Symbol | |
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| ID | 3970310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2948763 |
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| End bp | 2951795 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925829 |
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| Product | FAD linked oxidase-like |
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| Protein accession | YP_532586 |
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| Protein GI | 90424216 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.400601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTGC GCCTTGCGAA TTCACGGGCC CCTGCCCCGC GGCACGCCGA ACTAGCCGCC
GAGCTGCGGG CGCGCGGATT CGAGGGAGAT CTGGCGCACG CCTATGGCGA ACGTATCGTC
GCGGCGACCG ATAACTCGAT TTACCAGCTC CTGCCGGAGC TCGTCGTCTT CCCGCGGAGC
GTGGAAGACC TGGTGCGGGT CGCCCGTGTA ACGGCCGAGC CGCGCTTTGC AAATATCGTG
CTCGCACCTC GCGGTGGCGG AACGGGCACC AACGGCCAGT CGCTGACCGA AGGCGTTGTG
GTCGATGTCT CGCGCCACAT GAACGGAATT CTCGAGATCA ACCCGGAGGA GCGCTGGGTT
CGGGTACAGG CCGGCGTAGT TAAGGACCAG CTCAATGCCG CGTTGGCCGA ACACGGCCTG
TTCTTCCCGC CCGAACTCTC AACCTCCAAC CGCGCCACGA TCGGGGGCAT GATCAGCACC
GATGCCAGCG GCCAGGGCTC CTGCCTCTAC GGCAAGACGC GTGACCACGT GCTGGAGCTG
ACCACCGTCT TGCTGGATGG CACGGCCTGG ACATCGCGGG CGCTGGAAGA TGATGAGCTG
CAGCAGATCC AACAGCGCAG CGACCTCGTC GGCACCGTCC ACCGACTGAT CGACACGGTC
CAGCGCGAGC AAGCGGACGC GATCGCCGCC CATTTCCCGA AGCTGAACCG GTGCCTGACC
GGCTATGACC TCGCGCACAT CCGTGATGAT CGCGGCCGCT TCAACCTGAA CGCGATCCTT
TGCGGCAGCG AGGGCACGCT CGGGCTGATC GCGGAAGCCA AACTGAACGT GGTGCCGATC
CCGAAATACA GCGCATTGGT CAATGTGCGC TATGGCAGTT TCGATGCGGC GTTGCGTGAC
GCGCAGGACC TGATGCGGTT TGGCGCCGCT TCGATCGAGA CCGTCGATTC CAAGGTGCTC
GGCCTTGCGC AGGACGATGT GGTCTGGGAC TCGGTCCGGC AATACTTCCC GCAGGACGAT
CGGCAGCGCG CCATGGGCGC GAACCTCGTC GAGTTCGTTG GCGACAGCAA TGAGAAGGTC
GAGGCGGCGA TCGGCCGGAT CGCGGAGGCG CTTGGCTCGG CTGTGCCGTC GCGCGGTCGC
CTCGGCTTTA CGGTGGCCCG CGGCGCAAGC GAGGTGAACG CAATCTGGGC CATGCGCAAG
AAATCGGTCG GTCTGCTCGG CAATATGCAC GGCGACAAGC GGCCGATTCC CTTCGTGGAG
GACACCGCCG TTCCACCCGA GAATCTGGCC GATTACATCG CCGAGTTCCG AGCCCTGCTC
GACGCCCACG GGCTGGTCTA CGGCATGTTC GGCCATGTCG ATGCCGGCGT GCTGCATGTG
CGTCCGGCCA TCGACATGAA GGACCCGGCC CAGGAGCCGC TGATCCGAGA AATCACCGAA
CAGGTTGTCC AGCTTACCGA GAAATATGGC GGGCTGCTCT GGGGTGAGCA TGGCAAGGGC
GTGCGCTCCG AGTTCTCGCC ACGCTTTTTC GGACCGCTCT ATCCGACGTT ACAGTCGATC
AAGGCCGCCT TCGACCCCCG CAACCAGCTC AATCCGGGAA AGATTGCGGC GCCCGCTGAT
GGCGTCCTGT TGACCATTGA TGGGCTGACC ACGCGCGGTC AGATCGACCG GGTGATCCCT
GCTCCCACCC GCGCCGCTTA CGACGGGGCG CTCCACTGCA ACGGCAACGG GGCCTGCTTT
ACCTGGGATC CGGACGAAGC GATGTGCCCC TCCTACAAGG CCACGCGCGA CCGCCGGCAT
TCGCCGAAGG GCCGCGCCTC GCTCACTCGC GAATGGTTGA GGCAGTTGGC GACACTCGGC
ATCGATCCGA TCGCCGAGGC TGCGGCGCTT CGGCAACGCT CCGGTTGGCG GCATTTTCCC
GCGCGGCTGC GCAATAGCTG GGCGCGCGAG CCGGACTTCT CCCATGCCGT GAAAGAAGCG
ATGGACGGTT GCCTCGCGTG CAAGTCCTGC AGCGGGCAGT GTCCGATCAA GGTTGACGTG
CCAGCCTTGC GAGCGAAATT CCTGGAAATC TACCACGGCC GCTATCTGCG GCCGCTGCGC
GACCACATGG TCGGTTCACT GGAGACGATG TTGCCCCTGC TCGGGAGGAT GGGGTGGCTG
TATAACGCCG CCATCGCCAG TCCGCCCGGC CGTGCCGCGC TACGCGCGAT CGGCATGGTG
CATACGCCGC GGCTTTCCGG CATTTCGATG CGACGGGAAC TGACCGCGCG CGGAATTGCG
ATGGCAACCC CGCAGGCGCT TGCCGCGCTC CCGGTTGAGC AACGCGCGCG TAGCGTGGTG
CTGGTGCAGG ACGCCTTCAC GAGCTGGCAT GAGTCGCATG TCGTGCTCGC AGTACTCGAT
CTCATGCAGG CGATCGGATT CAGGCCATTC ATCGCGCCGC TCCGCCCCAA TGGAAAGCCG
CTGCATGTGC AAGGCTTTCT CGGCGCCTTC ATCCGCACCG CCTCCAGCAA CGCCGCCATG
CTGCGCGACC TGGCAGCGAC CGGCATCGAG CTGGTTGGCG TGGATGCTTC CATGACGCTG
ACCTACCGCT CGGAATACGA CATGCTGGCT GAAGCAGACC GGCCGCCGCC CGTGCTATTG
CTCCAGGAAT GGCTGGCTCG ACACCGCGAC GCCATCCCGA GGATGGTCGG CGCCGGTGGT
GAATACCTGC TGCTGCCGCA TTGCTCGGAG CGCTCGCTCG CCCTCACGAG TCTGCGGGAC
TGGCAAACGG CATTCGCGGC CGCGGGCACC AGTCTGCGCG TGCTGCCGTC GGGCTGCTGC
GGCATGGCCG GAACCTATGG CCACGAGACG GAACACCGGG CCTCGTCCGA GCAAATCTAC
GGCATGAGCT GGGGACGTCA GGTCAAAAGA TGGGCGCAGA GCGGCCGCTT GCTGGCGACC
GGCTACTCCT GCCGATCGCA GGTCAAGATC ATCGACGGGC AGATGCTCGC GCACCCCGCG
CAGGCCTTGC TCGCGTGTCT CGGGAAACGC TGA
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| Protein sequence | MLVRLANSRA PAPRHAELAA ELRARGFEGD LAHAYGERIV AATDNSIYQL LPELVVFPRS
VEDLVRVARV TAEPRFANIV LAPRGGGTGT NGQSLTEGVV VDVSRHMNGI LEINPEERWV
RVQAGVVKDQ LNAALAEHGL FFPPELSTSN RATIGGMIST DASGQGSCLY GKTRDHVLEL
TTVLLDGTAW TSRALEDDEL QQIQQRSDLV GTVHRLIDTV QREQADAIAA HFPKLNRCLT
GYDLAHIRDD RGRFNLNAIL CGSEGTLGLI AEAKLNVVPI PKYSALVNVR YGSFDAALRD
AQDLMRFGAA SIETVDSKVL GLAQDDVVWD SVRQYFPQDD RQRAMGANLV EFVGDSNEKV
EAAIGRIAEA LGSAVPSRGR LGFTVARGAS EVNAIWAMRK KSVGLLGNMH GDKRPIPFVE
DTAVPPENLA DYIAEFRALL DAHGLVYGMF GHVDAGVLHV RPAIDMKDPA QEPLIREITE
QVVQLTEKYG GLLWGEHGKG VRSEFSPRFF GPLYPTLQSI KAAFDPRNQL NPGKIAAPAD
GVLLTIDGLT TRGQIDRVIP APTRAAYDGA LHCNGNGACF TWDPDEAMCP SYKATRDRRH
SPKGRASLTR EWLRQLATLG IDPIAEAAAL RQRSGWRHFP ARLRNSWARE PDFSHAVKEA
MDGCLACKSC SGQCPIKVDV PALRAKFLEI YHGRYLRPLR DHMVGSLETM LPLLGRMGWL
YNAAIASPPG RAALRAIGMV HTPRLSGISM RRELTARGIA MATPQALAAL PVEQRARSVV
LVQDAFTSWH ESHVVLAVLD LMQAIGFRPF IAPLRPNGKP LHVQGFLGAF IRTASSNAAM
LRDLAATGIE LVGVDASMTL TYRSEYDMLA EADRPPPVLL LQEWLARHRD AIPRMVGAGG
EYLLLPHCSE RSLALTSLRD WQTAFAAAGT SLRVLPSGCC GMAGTYGHET EHRASSEQIY
GMSWGRQVKR WAQSGRLLAT GYSCRSQVKI IDGQMLAHPA QALLACLGKR
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