| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2669 |
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| Symbol | |
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| ID | 3970471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2900131 |
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| End bp | 2901078 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637925780 |
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| Product | xylose isomerase-like TIM barrel |
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| Protein accession | YP_532538 |
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| Protein GI | 90424168 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0145308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.880216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATGATCC GATTTGGAGT TGCAGGCTTC CCCCCTGCAT TCAAGGAGTC GAAGTATAGA
AAGAACAGGT TCGATGTCCT GCATTGGCTC GTCGATCTGC AACTCGATGC GTTCGAGTTG
CAGATGACGT ATGGTCCGCG AATGACTGCC GAGAATTGCG TCCTCTTTCG TCAGATGTCT
GAGGCCACTG GGGTGCGGCT GTCTGTTCAC GCTTCGTACT TCATTGTCTT TACAAGCGAC
GATCCGGCGA AGATTCTGCA ATCCGAGGAT ACGCTAAAGC GCACGTATGA GGCAGCTGAA
CGTCTTGGGG CAAGGACGAT CGTGCTGCAT CCTGGTCCGC TATACGGGGC GAGCGGTAGT
GAGCCTCTCG AACGATTCGT GGAGAATACT GGAAATTGCT TGAATTCAAT AGGTCGGACC
GACATTGGGC TCTTTGTGGA AACAGCCGGC AAAGTCGGGC AGCTCGGTTC GGTTGACGAG
ATCCTGGAAA TTTGTACCCG GCTTGACGGC ACATTCCCCT GCATCGACTT TGGCCACGTG
CATGCTCGCA CACTAGGGAC GCTCGAAGAT CCCGCAGCTG TTGATGCCAT TGCGTCACAA
CTAGAATTGT ATCTGCAATC AAGAGACAAT TTACGAATCC ATTTTCATTA TACGCCGATC
CATTTTGGTC AGCGTGGCGA AATTCAACAC CGAGCCATTC ATGATCGGTA TCCGCCGTTA
GCTCAACAAT CGCTTTTCGG GACTTCCACG CCGGGAGAGC AATCTCGGGA TGGGCTGTTT
CATCCGCGAG TGGAACCCGT AGCTGCTGCC CTTGCTCGCC TATGTGTTGC TTCGCGGATG
GACTTCACTG TCATCTCAGA AACGCACGAC AGTCAGGAGG AGGGCGCCGC CGCTCTGAGA
GATGCCGTCA TTTGCCATAA TTTGGGTACT AGGTTGGATG CGGCTTAA
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| Protein sequence | MMIRFGVAGF PPAFKESKYR KNRFDVLHWL VDLQLDAFEL QMTYGPRMTA ENCVLFRQMS
EATGVRLSVH ASYFIVFTSD DPAKILQSED TLKRTYEAAE RLGARTIVLH PGPLYGASGS
EPLERFVENT GNCLNSIGRT DIGLFVETAG KVGQLGSVDE ILEICTRLDG TFPCIDFGHV
HARTLGTLED PAAVDAIASQ LELYLQSRDN LRIHFHYTPI HFGQRGEIQH RAIHDRYPPL
AQQSLFGTST PGEQSRDGLF HPRVEPVAAA LARLCVASRM DFTVISETHD SQEEGAAALR
DAVICHNLGT RLDAA
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