| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2613 |
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| Symbol | |
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| ID | 3973292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2846521 |
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| End bp | 2848335 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925724 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_532482 |
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| Protein GI | 90424112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.674629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.538496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGC TCGCGGCGGC TGGCACGGCC GTGATCATCG GATCCGTGGC GGCTTCGGCC
GCCGATCCTG CCCCTGCAGT TTCTAGCCAT GGCATCGCCA TGCACGGCGC GCCGGCGCTG
CCCGCCGATT ACGTCCAGAT GCCCTACGTC AATCCGCAGG CTCCGAAGGG CGGCAGGCTG
ATCCTGGGCC TGCTCGGCGC CTTCGACAGT CTCAATCCGC TGATCGTCAA AGGTCTCGCC
GTGCAGCAGA TCCGCGGCTA CGTCATCGAA AGCCTGATGG CACGGGGCAA TGACGAGGCC
TTCACGCTGT ACGGCCTGTT GGCGCAGAGC GTCGAGACCG ACGACGCCCG CAGCTACGTC
ACCTTTCGAA TCGACCCGCG GGCGCGGTTC GCCGACGACC ATCCGCTGCG CGCCGACGAC
GTGATCTTCT CCTGGCAATT GCTGCGCGAC AAGGGCCGGC CCAATCACCG GATGTACTAC
GCCAAGGTCG CCAAGGCGGA AGCGCTCGAT TCCCTCACCG TGCGATTCGA TTTCGGCGGC
AGCAGCGACC GCGAACTGCC GTTGATTCTC GGGCTGATGC CGGTGCTGCC GAAGCACGCG
GTCAATGTCG AGACCTTCGA AGAAACCTCG CTCGCCGCCC CGCTCGGCTC CGGTCCCTAT
CGCGTCAGCG CGGTTCGACC GGGCGCCAGC GTGACGTTGA CCCGCAATCC GAACTATTGG
GGCCGCGATC TGCCGGTCAA TCGCGGGCTG TGGAATTTCG ACGAGGTCCG GCTCGACTAC
TATCGCGAGG CCAACGGGCT ATTCGAAGCC TTCAAGCGCG GGCTGTACGA TGCCCGGGTG
GAGAACGAGC CGCTGCGCTG GCACGAGGGC TATGACTTCC CGGCGGCGCG CCATGGCGAG
GTGATCCGCG ACACGATCAA GACCGGACTG CCGCAGCCTT CGGAATATCT GGTGTTCAAC
ACCCGGCGCC CGGTGTTCGC CGATATCAGG GTCCGCGAGG CGCTGACGCT GCTGTTCGAT
TTCCAGTGGA TCAATCGCAA CTACTTCTAT GGCCTGTATG CCCGTTCCGC CGGCTACTTC
GCCGGCTCCG AACTGTCGGC CTATGCCCGC CCCGCCGGTC CCCGCGAGCG CGAATTGCTT
GGGCCGCTGC TTGACCGGCT GCCTGCGGCG ATCATCGACG GCAGCTATCG GCTGCCCGCC
GGCGACGGCT CCGGCCGCGA CCGCGAAGCG CTGCGACAAG CGCTGGCGCT GCTGGCGCAA
GCCGGCTTTG AGCTCGACGG CACCGCCTTG CGGCAGCGCT CGACCGGCCA GCAACTGAGC
TTCGAGATGC TGGTGACGAC CCGCGATCAA GAGCGCATCG CGCTGGCTTT CGTCCGCGAT
CTCAAGCGCG CGGGTATTCA AGCCAACGTC CGCGCGGTCG ACGGCGTGCA GTTCGACCAG
CGCCGCCTGG CCTTCGATTT CGACATGATC CAGAACCGCT GGGACCAATC GCTGTCGCCG
GGTAATGAAC AGTCGTTCTA CTGGGGGAGT GCGGCGGCGG ACAATCAGGG CACCCGCAAT
TACATGGGCG CCAAGGACCC GGCGATCGAC GCGATGATCG CGGCCTTGCT GGAAGCGCGC
GATCGCCCCG ACTTCGTGTC CGCAGTGCGG GCCTTAGACC GCGTCCTGAT GGCGAGGTTC
TACGCAATTC CAGCGTATAA CGTGCAAGAA CAATGGATCG CCCGCTGGAA TCGGATAGAA
CGGCCTAGGG CCAACGCCTT GTCCGGCTAT CTGCCCGAAA CCTGGTGGCA CGCGCCACCG
ACGTTGCAAA GGTGA
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| Protein sequence | MSRLAAAGTA VIIGSVAASA ADPAPAVSSH GIAMHGAPAL PADYVQMPYV NPQAPKGGRL
ILGLLGAFDS LNPLIVKGLA VQQIRGYVIE SLMARGNDEA FTLYGLLAQS VETDDARSYV
TFRIDPRARF ADDHPLRADD VIFSWQLLRD KGRPNHRMYY AKVAKAEALD SLTVRFDFGG
SSDRELPLIL GLMPVLPKHA VNVETFEETS LAAPLGSGPY RVSAVRPGAS VTLTRNPNYW
GRDLPVNRGL WNFDEVRLDY YREANGLFEA FKRGLYDARV ENEPLRWHEG YDFPAARHGE
VIRDTIKTGL PQPSEYLVFN TRRPVFADIR VREALTLLFD FQWINRNYFY GLYARSAGYF
AGSELSAYAR PAGPRERELL GPLLDRLPAA IIDGSYRLPA GDGSGRDREA LRQALALLAQ
AGFELDGTAL RQRSTGQQLS FEMLVTTRDQ ERIALAFVRD LKRAGIQANV RAVDGVQFDQ
RRLAFDFDMI QNRWDQSLSP GNEQSFYWGS AAADNQGTRN YMGAKDPAID AMIAALLEAR
DRPDFVSAVR ALDRVLMARF YAIPAYNVQE QWIARWNRIE RPRANALSGY LPETWWHAPP
TLQR
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