| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2444 |
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| Symbol | |
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| ID | 3971374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2644835 |
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| End bp | 2647360 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925552 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_532314 |
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| Protein GI | 90423944 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.51755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.253645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTG GAATGCGAGT GTTGCGGGGA GGCCTGACGG CAGCCTTGGT ATTTTTCGCC
GTGCCTGTCG CCGCTACGGT GACTGCAGCG CTGCTGACGT CGCCTGCGTC TGCCCAAACG
GCAGACTCCA TCGCCGTCGA GGGGAATCGG CGCGTCGAAG TGGAAACCAT CCGCTCCTAT
TTCAAGGCGG GTCCCGGTGG TCGGCTCGAC CAGGGGCGGA TCGATGACGG CCTCAAGGCC
CTGATCGAGA CCGGCCTGTT CCAGGACGTG CGCATCAACC AGGCCGGCGG CCGGTTGGTG
GTCACCGTGG TGGAAAACCC GGTGATCGGC CGCGTTGCCT TCGAGGGCAA CAAGAAGGTC
AAGGACGAAC AGCTCAGCGC GGAACTCCAA TCGAAGCCGC GCGGCACGCT GTCGCGCCCG
ATGGTGCAAT CCGACGCGCT GCGTATCGCC GAAATCTATC GCCGCTCCGG CCGCTACGAC
GTCCGCGTCA CGCCGGAAAT CATCGAGCAG CCGAACAACC GCGTCGACCT GGTGTTCACC
GTCGAGGAGG GCGCCAAGAC CGGCGTCCGC TCGATCGAAT TCATCGGCAA CAACGCGTTC
TCGTCCTATC GCCTCAAGGA CATCATCAAG ACCCACGAGT CCAATTTCCT GAGCTTCCTG
GCCTCGGGCG ATCTGTACGA TCCGGATCGG GTCGAAGCCG ACCGCGACCT GATTCGCCGC
TATTACCTGA AGCACGGCTA CGCCGACGTG CAGGTGGTGG CCGCGCTGAC CGAATACGAT
CCCGAGAAGA AGGGCTTCCT GGTCACTTTC AAGATCGAGG AAGGCCAGCA GTATCGCGTC
GGTTCGGTCG AATTCCAGTC CACCATTCCG ACGCTCGATG CCAATTCGTT CCGCAGCTAT
TCGCGGGTGT CGGTTGGCTC GCTGTACAAC GCCGAAGCGC TGGAGAAGTC GGTCGAGGAG
ATGTCGATCG AGGCGTCGCG GCGCGGCTAT TCCTTCGCCA CCGTGCGTCC GCGCGGCGAC
CGCAACTACG ACAACCACAC CGTGTCGATC GTGTTCGCGA TCGATGAAGG TCCGCGCACC
TATATCGAGC GCATCGACGT GCGCGGCAAC ACCCGCACCC GGGATTACGT GATCCGCCGC
GAGTTCGATC TGTCCGAAGG CGACGCCTAC AACCGCGCCT TGGTCGATCG CGCCGAGCGC
CGGCTGAAGA ACCTCGACTT CTTCAAGAGC GTGAAGGTCG TCACCGAGCC CGGCTCGTCG
AGCGACCGCA TTATCCTGGT GGTCGATCTC GAAGAGAAAT CCACCGGCGA CTTCTCGGTG
TCGGGCGGCT ATTCCACCAG CGACGGCGCG TTGGCCGAAG TCTCGGTGTC GGAACGCAAC
TTCCTCGGCC GCGGCCTGTT CGCCAAGGCT TCGGTGAGCT ACGGCCAGTA TTCCCGCGGC
TATTCGCTGT CCCTGGTCGA GCCCTATCTG CTCGACTACC GGGTGGCGCT CGGCCTCGAC
CTCTATCAGC GCCAGCAGCT CGCCAACAGC TACGTCTCCT ACACCACCAA GACGCTCGGC
TTCAGCCCGC GGCTCGGCTT CGGTCTGCGG GAAGATTTGT CGCTGCAGGT GCGCTATTCG
ATCTATCAGC AGGAAATCTC GCTGCCGGAC GCGCTGAACA ATTGTAACAA CAACTTCGGG
TCGTCCTATT TCCCGACCCC GGGCTTCATC AATGCCGGCA ACCCGAACAA CACGTCGTAT
GGTTCATATG GCTGTCTCGG CGACGGCGAA GCCGCGCTTC CGGTCCGCAT CGAGCTGCAG
GACGGCAAGG CGCTGACCTC GGCGATCGGC TACACGCTGA CCTACAACAC CCTCGACAAC
AACAAGAACC CGACCGACGG TCTGCTGATC GATCTGCGGC AGGACTACGC CGGCGTCGGC
GGCGACGTCA GCTATCTGAA GTCGGCCTTC GATGCGAAGT ACTACACTCC GCTGGTCGCC
GATATCGTCG GGTTGATCCA CGTGCAGGGC GGTATCCTGA ACGAAGCCGG CGGCAAGGAC
ATCCGCATGC TGGATCATTT CCAGATGGGT CCGAACCTGG TGCGCGGCTT TGCGCCGAAC
GGCATCGGTG CGCGCGACAT CTCGAACTAC GGTCTGACCG GCTACGGCGA TGCGCTGGGC
GGCACCAAAT ATTGGGGTGC GTCGGCTGAA TTGCAGATGC CGTTCTGGTT CCTGCCGAAG
GAAGTCGGCG TCAAGGGCGC GATCTATGCC GATGCCGGTT CGCTGTGGGA CTACAAGGGC
CCGACCTCGT GGGCGCTCAC CAACCAGGTC AACACCGCGA CCTGCGTCCC CGCCACCAAG
AACGATGTCG GTACCTGTGC CGGCATGACC TACGACGACA GCAATCTGGT CCGCACCTCG
GTCGGTGTCG GCTTGATCTG GGCCTCGCCG TTCGGTCCGC TGCGCTTCGA CTACGCGATC
CCGCTCACCA AAGGTCAGTT CGACCGCGTG CAGCAGTTCA AGTTCGGTGG CGGCACCTCG
TTCTGA
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| Protein sequence | MNVGMRVLRG GLTAALVFFA VPVAATVTAA LLTSPASAQT ADSIAVEGNR RVEVETIRSY
FKAGPGGRLD QGRIDDGLKA LIETGLFQDV RINQAGGRLV VTVVENPVIG RVAFEGNKKV
KDEQLSAELQ SKPRGTLSRP MVQSDALRIA EIYRRSGRYD VRVTPEIIEQ PNNRVDLVFT
VEEGAKTGVR SIEFIGNNAF SSYRLKDIIK THESNFLSFL ASGDLYDPDR VEADRDLIRR
YYLKHGYADV QVVAALTEYD PEKKGFLVTF KIEEGQQYRV GSVEFQSTIP TLDANSFRSY
SRVSVGSLYN AEALEKSVEE MSIEASRRGY SFATVRPRGD RNYDNHTVSI VFAIDEGPRT
YIERIDVRGN TRTRDYVIRR EFDLSEGDAY NRALVDRAER RLKNLDFFKS VKVVTEPGSS
SDRIILVVDL EEKSTGDFSV SGGYSTSDGA LAEVSVSERN FLGRGLFAKA SVSYGQYSRG
YSLSLVEPYL LDYRVALGLD LYQRQQLANS YVSYTTKTLG FSPRLGFGLR EDLSLQVRYS
IYQQEISLPD ALNNCNNNFG SSYFPTPGFI NAGNPNNTSY GSYGCLGDGE AALPVRIELQ
DGKALTSAIG YTLTYNTLDN NKNPTDGLLI DLRQDYAGVG GDVSYLKSAF DAKYYTPLVA
DIVGLIHVQG GILNEAGGKD IRMLDHFQMG PNLVRGFAPN GIGARDISNY GLTGYGDALG
GTKYWGASAE LQMPFWFLPK EVGVKGAIYA DAGSLWDYKG PTSWALTNQV NTATCVPATK
NDVGTCAGMT YDDSNLVRTS VGVGLIWASP FGPLRFDYAI PLTKGQFDRV QQFKFGGGTS
F
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