Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2440 |
Symbol | |
ID | 3971370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2640627 |
End bp | 2641385 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925548 |
Product | undecaprenyl pyrophosphate synthase |
Protein accession | YP_532310 |
Protein GI | 90423940 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.138642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.112673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGAACG TCGCCGCGCC CGCGCCTGAC CGATCGGATT CGTCCGAGGT GCCTGTGCAC GTCGCCATCA TCATGGACGG TAACGGCCGC TGGGCGGCGG CGCGCGGATT GCCGCGCGCC GAAGGCCACC GCCGCGGGGT CGACGCGCTG CGCCGCGTGG TCCGCGCCGC CAACGAACTC GGCATCGCCT ATCTGACGAT CTTTTCGTTC AGCTCGGAGA ACTGGTCGCG GCCGGCCAGC GAAATCGGCG ATCTGTTCGG CCTGCTGCGA CGCTTCATCC GCAACGATCT GGCGACGCTG CACCGCGACG GCGTCCGGGT CCGGGTGATC GGCGAGCGGG ACGGCCTGGA GTCGGACCTT TGCGCGCTGT TGACCGAAGC CGAAGAGCTG ACCCGCAACA ATACCCGGCT CAATCTGGTG GTCGCGTTCA ACTACGGCTC GCGGCAGGAG ATCGCCAATG CGGCGCAGCG GCTGGCCCGC GAAGTCGCCG AGGGCAAGCG CGATCCCGCC AGCATCGACC CCGACAGCCT CAGCCAGTAT CTCGACGCCC CGGACATTCC CGATCCCGAT CTGATCATCC GCACCAGCGG CGAGCAGCGG CTCTCCAACT TTTTGATGTG GCAGGCGGCT TACAGCGAAC TTGTGTTCGT GCCGATTCAC TGGCCTGATT TTGACAAGGC GGCGCTTGAG GGCGCGATCG CCGAATACGC CCGCCGTGAA CGCCGGTTCG GCGGTTTGGC GGCGAAAACA GGATCGTGA
|
Protein sequence | MSNVAAPAPD RSDSSEVPVH VAIIMDGNGR WAAARGLPRA EGHRRGVDAL RRVVRAANEL GIAYLTIFSF SSENWSRPAS EIGDLFGLLR RFIRNDLATL HRDGVRVRVI GERDGLESDL CALLTEAEEL TRNNTRLNLV VAFNYGSRQE IANAAQRLAR EVAEGKRDPA SIDPDSLSQY LDAPDIPDPD LIIRTSGEQR LSNFLMWQAA YSELVFVPIH WPDFDKAALE GAIAEYARRE RRFGGLAAKT GS
|
| |