| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2323 |
|---|
| Symbol | |
|---|
| ID | 3973281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2525166 |
|---|
| End bp | 2525765 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637925431 |
|---|
| Product | YceI |
|---|
| Protein accession | YP_532196 |
|---|
| Protein GI | 90423826 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2353] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.977653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGAT CTCTGCTGTT GCCCGTCCTG GCCGCCACTT TGGCCTTCAC CGTCCCGGCG
CTGGCGCAAA CCGCCGCGGC CCCGCAGGTC GAAGCCGGCA CCTACGCCGT CGACCCCGGC
CACACCCAGG TGGAGTTCGG CGTCTCCCAT ATGGGCTTCA CCAATTTCCG CGGCCGGTTC
AGCGACGTCT CGGGCACGCT GCAGCTCGAT CCGAAGGCGC CGGCGAAGAG CACCTTCGAC
GTCACCGTGC CGACCATCTC GGTGAATACG CCGGTCGCCA AGCTCAATGA CGAGCTGAAG
AGCGACCAAT GGCTCGACGC CAAGGCCTTC CCGCAGATCA CCTTCAAGGC CACCAGCGTC
ACCCCCACCG GCCCGAATGA GGCCAAGGTG ACCGGCAACT TCACCCTGCA CGGCGTCACC
AAACCGCTGA CGCTCAATGC CAAGCTGCAC GGCGCCGGCG TCAATCCGCT GAACAAGAAG
GTCACCGTCG GCTTCGATCT CACCGGCTCG CTCAAGCGTA GCGATTTCGG CGTCAAGACC
TACGTGCCGC TGATCGGCGA CGATGTCGAG ATCACCATCA GCGCCGCGTT TGAAAAGTAG
|
|---|
| Protein sequence | MARSLLLPVL AATLAFTVPA LAQTAAAPQV EAGTYAVDPG HTQVEFGVSH MGFTNFRGRF
SDVSGTLQLD PKAPAKSTFD VTVPTISVNT PVAKLNDELK SDQWLDAKAF PQITFKATSV
TPTGPNEAKV TGNFTLHGVT KPLTLNAKLH GAGVNPLNKK VTVGFDLTGS LKRSDFGVKT
YVPLIGDDVE ITISAAFEK
|
|---|
| |