Gene RPC_2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2292 
Symbol 
ID3973733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2493103 
End bp2494113 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content72% 
IMG OID637925400 
Producthypothetical protein 
Protein accessionYP_532165 
Protein GI90423795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.281162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCC GAGCGCTCAG TTTAGCGACG GTCGTGCTGC TGATCGGTGG CGCCATGGCG 
CAGCCGGCAC AGGCTCAGAA CCTCGAAGCC GGAAAGAGCC CATCGCAGAT TTTCGCCGGC
GCCTGTACGG TGTGTCACAA GAGTCCGCGC GGGCTGCTGC GGACCGTGGC GCCGGGCGCG
CTGCCGGGCT ATCTGCGCCA GCACTACACC ACCAGCAGCG ACATGGCGGC GCTGTTGAGC
GCCTATCTGA TCTCCAACGG CGCCACTGAT ACGCGCTATG GCGTCGCGCC GGCCAAGCCG
GGCCGCGACG GCAAGCCGGA AGCCGCGCCC GGTGCGGCAC CCGATCAGGC GGAAGGCCGC
CCCAGCCGCC GCCAGCGCCA GGAAGCGCAG CCGCGGGAGG CCGCACCGCC CAACGCCGAC
GGTTTGCCGC CGCAGGAGGC CACCCCCGGC CGGCGCCATC GCAATGCCAA GCGCCAGGCC
AAGCCCGAAG CGGAGAAGCC CGCGATCGCG GCGCCGGCCG TCGAAGGCGA GCCGCCCGCG
GTGGTCGAGG AGAAGCCGGC GCCCCGGCAA AAGAAGAGCA AGAAGGGCAA GCATCGTCGC
GAGGCCAAGC CGGAGCCGGC TGATGCGGTG AAGACCGCTC CCGCCGCCAC CGAGCCGGCG
AAGAGCGAAC CGGCCAAAAC CGCGCCTGCG AAAGACGACG CCGCGAAATC TGATGCGCCG
AAGTCTGAAG CTCCCAAGGT CGAGGCCCCC AAAGTCGAGG CCCCCAAGGC CGAGGTCCCC
AAGGCCGAGC CGATCAGGTC CGAACCCGCC AAGCCGGTGG AGCCGGCAGC ATCCGAGCCG
GCGAAATCCG AACCGGTGCC GCTGCGGTCC GATCCGGTGC CCGCGGTGAC TCCGGCGCCG
AAGGCCAGTG ACGGCGAGTC TTCGCCGAAC CCGCGTCCCT CGGCCTCAGA GGGGGCGGCG
TCGCCGGCCA CGCCGGCGCC TGCCGACGAG ATGGTGCCGC CGCTGAAATA G
 
Protein sequence
MSSRALSLAT VVLLIGGAMA QPAQAQNLEA GKSPSQIFAG ACTVCHKSPR GLLRTVAPGA 
LPGYLRQHYT TSSDMAALLS AYLISNGATD TRYGVAPAKP GRDGKPEAAP GAAPDQAEGR
PSRRQRQEAQ PREAAPPNAD GLPPQEATPG RRHRNAKRQA KPEAEKPAIA APAVEGEPPA
VVEEKPAPRQ KKSKKGKHRR EAKPEPADAV KTAPAATEPA KSEPAKTAPA KDDAAKSDAP
KSEAPKVEAP KVEAPKAEVP KAEPIRSEPA KPVEPAASEP AKSEPVPLRS DPVPAVTPAP
KASDGESSPN PRPSASEGAA SPATPAPADE MVPPLK