| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2090 |
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| Symbol | |
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| ID | 3971855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2287987 |
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| End bp | 2289543 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925198 |
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| Product | hypothetical protein |
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| Protein accession | YP_531963 |
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| Protein GI | 90423593 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.647831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCCACG CCATGAACGG CGCACATTCG GTTGTGCAGA CCCTGGTCAA TTGCGGCGTT
GAAGTCTGCT TCGCCAATCC CGGCACCTCG GAAATGCATT TTGTCGCAGC GCTCGATGCG
GTCGGCGGCA TGCGGCCGGT GCTGTGCCTG TTCGAAGGCG TGGCGACCGG CGCCGCCGAC
GGCTACGGCC GGATCGCCGG CAAGCCGGCG GCGACGCTGC TGCACCTCGG CCCCGGCCTC
GCCAACGGCC TCGCCAATCT GCACAACGCG CGGCGCGCGG CGAGCCCGAT CGTCAATGTG
GTCGGCGATC ACGCCACCTA TCACCTGCAA TACGATGCGT TGCTGACCTC GGACATCGCC
GGCTTCGCCC GGCCGGTGTC GTCGTGGATT CATCAATCGA CCAGCGCCGG CAGTGTCGGC
GCAGACGCCA CGCGCGCGGT GCAGGCGGCG CGCTCAGCGC CGGGCGGCAT CGCCACTTTG
ATCATGCCGG CCGACGTGGC GTGGAACGAA GCCGCGCTCG CGGCGCACAA GCTCGACGAT
ATTGGCCCCT CGCGGGTTGC CGCTGACAGC ATCGAGGCCG TCGCGGCGCT GCTCGGCAAC
GGCAAGAAAT CCGCGCTGCT GATCCGCGGC GATGGCTTGC GCGGCGCCGG CCTCGAGGCC
GCCGGGCGCA TTCAAGCCAA AACCGGCGCG AGGCTGTTGT GCGACACCTT CGCGCCGCAT
GGCGAATTCG GCGCCGGCCG GGTGCCGGTC GAGCGCATTC CGTATTTCGC CGAACAGATC
GTGATGTTCC TAAAGGATGT CGAGCAACTG ATCCTGGTCG GCGCTAAGCC GCCGGTGTCG
TTCTTCGCCT ATCCCGGCAA GCCGAGCTGG GGCGCGGCGG AGGGCTGCGT CTTCAGTTAC
TTGGCACAGC CGACCGAGGA CTGCGCCCGC GCGCTGCAAG ATCTCGCCGA CGCGCTGGAT
GCGCCGGCCG AACCCGCGAC GCGCACCCCG CTGGTGCTGC CGGAATTGCC GAAGGGCAAG
CTGAACTCGC TCGGCGTGGC GCAAGTGATC GCGCATTACA CCCCCGACAA CGCGATCTAC
GCCGACGAAT CCGCCACCTC CGGGCTGGCG CTGATGATCC ATCTGGCGCG GGCGCGGCCC
TATACGCATC TGCCGCTGGC CGGCGGTTCG ATCGGGCAGG GACTGCCGCT CGCGGTCGGC
GCGGCACTCG CCGCCCCGGA CCGCAAGGTG GTGTGCCCCT CCGGCGACGG CGGCGCCGCC
TACACGCTGC AGGCGCTGTG GACCATGGCG CGGGAAAATC TCGACGTCAC CGTGGTGATC
TTCGCCAACC ATTCCTACGC GATTTTGAAC ATCGAGCTGC AGCGGGTCGG CGTCGGCAGC
GCCGGTGCCA AGGCGCTGTC GATGCTCGAT CTGCACAATC CGGAAATCAA CTGGGTGCAG
ATCGCCTCCG GCCTCGGGGT CGCGGCCAGC CGCGCCACCA CGGCAGAAGA ATTCACCGCG
CAATACGCCG ACGCGATGGC GCAGCGCGGA CCCCGCCTGA TCGAAGCGAT GATTTAG
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| Protein sequence | MGHAMNGAHS VVQTLVNCGV EVCFANPGTS EMHFVAALDA VGGMRPVLCL FEGVATGAAD
GYGRIAGKPA ATLLHLGPGL ANGLANLHNA RRAASPIVNV VGDHATYHLQ YDALLTSDIA
GFARPVSSWI HQSTSAGSVG ADATRAVQAA RSAPGGIATL IMPADVAWNE AALAAHKLDD
IGPSRVAADS IEAVAALLGN GKKSALLIRG DGLRGAGLEA AGRIQAKTGA RLLCDTFAPH
GEFGAGRVPV ERIPYFAEQI VMFLKDVEQL ILVGAKPPVS FFAYPGKPSW GAAEGCVFSY
LAQPTEDCAR ALQDLADALD APAEPATRTP LVLPELPKGK LNSLGVAQVI AHYTPDNAIY
ADESATSGLA LMIHLARARP YTHLPLAGGS IGQGLPLAVG AALAAPDRKV VCPSGDGGAA
YTLQALWTMA RENLDVTVVI FANHSYAILN IELQRVGVGS AGAKALSMLD LHNPEINWVQ
IASGLGVAAS RATTAEEFTA QYADAMAQRG PRLIEAMI
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