| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2060 |
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| Symbol | |
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| ID | 3974018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2255067 |
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| End bp | 2256059 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925168 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_531933 |
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| Protein GI | 90423563 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.212948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.235327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATAG ATCAATCATT TAGGTTTTCC GTCGCGCCGA TGATGGATTG GACCGACCGG
CACTGCCGGG TGTTCCACCG GCGGTTGTCG CGCCGCGCCC GGTTGTACAG CGAGATGCTG
ACCACCGGCG CGGTGATCCA TGGCGATCGG CAGCGGCTGC TCGGCTTCGA CGCCAGCGAG
CATCCGCTGG CGCTGCAGCT CGGCGGATCG GATTCGGCCG ATCTCGCCAC TGCCGCGAAG
ATCGGCGAGG ATTTCGGCTA CGACGAGATC AATCTCAACG TCGGCTGCCC GTCGGATCGG
GTGAAGGACG GCCGGTTCGG CGCCTGCCTG ATGGCTGAGC CGGCGCTGGT CGCCGAAGGC
ATTGCCGCGA TGAAGCGCGC GGTCAGCGTT CCGGTTACGG TGAAGTGCCG CATCGGCATC
GACGACCAGG ATCCGGAATT GGCGCTGGAT AGTTTGGCGC GCGCGGTGGT CGCCGCCGGC
GCCGACCTGC TGGTGGTGCA CGCGCGCAAG GCCTGGCTGA ACGGGCTGTC GCCGAAGGAG
AACCGCGACG TGCCGCCGCT CGATTACGAC CGGGTGTATC GGCTGAAGGC GGCGTTGCCC
GCCGTGCCGA TCGTGATCAA TGGCGGCATC GCCGGCATCG CCGAAGCCAA GCCGCATCTC
GGCCATGTCG ATGGCGTGAT GCTCGGCCGC GCCGCCTATC AGGAGCCGTG GCGATTGTTG
GCGGTCGATC CGGAATTGTT CGGCGAGCCG GCGCCGTATC CGAGCATGAC CGCGGCGCTG
CAAGCCATGA CGCCCTATAT CGAAGCGCAA CTGGCGCAGG GCACGCGGCT GCATTCGATC
ACCCGGCATT TCGTCGGCGC CTATCACGGC GTGCCCGGCG CCCGCGCGTT CCGCCGCCAT
CTCGCCGAGC AGGGCGTCAA GCCCGACGCC GGAATCGACG TGTTGCGCGA GGCGATCGCG
CGGGTCGAGG ATCGCGTCGT CGAAGTCGCG TGA
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| Protein sequence | MPIDQSFRFS VAPMMDWTDR HCRVFHRRLS RRARLYSEML TTGAVIHGDR QRLLGFDASE
HPLALQLGGS DSADLATAAK IGEDFGYDEI NLNVGCPSDR VKDGRFGACL MAEPALVAEG
IAAMKRAVSV PVTVKCRIGI DDQDPELALD SLARAVVAAG ADLLVVHARK AWLNGLSPKE
NRDVPPLDYD RVYRLKAALP AVPIVINGGI AGIAEAKPHL GHVDGVMLGR AAYQEPWRLL
AVDPELFGEP APYPSMTAAL QAMTPYIEAQ LAQGTRLHSI TRHFVGAYHG VPGARAFRRH
LAEQGVKPDA GIDVLREAIA RVEDRVVEVA
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