| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2015 |
|---|
| Symbol | |
|---|
| ID | 3973878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2195926 |
|---|
| End bp | 2197689 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637925124 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_531889 |
|---|
| Protein GI | 90423519 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCA TAACAGCCTT CAGCGCCGGC GCATATTCGA CCAGCCGCCA GACCGCGGAT
CTGCTGGCCC TCAAAGAACA GGTCAATACG CTGACCAGGC AGTTGAGCTC GGGGCGTGTT
GCGGAAACCT ATGCAGAGCT TGGCGTGCGA CGGTCCGAGA GCCTCAGTGC GCGTGGTATG
CTGAGCGCGC TTGACGGCTA CGACGCCGCC ATTTCATCGG TTCGGCCACG TGTCGAGCTT
GCGTCTGCGA GCCTCGGCCG AATTTCGAAA ATGACCACGA CGCTGCGTAA CGGTCTCACC
ACTAATCGGA GCGACGCCGA CGCGAATAGG GCGATGGCGC GCGATAGCCT AAACGGCGCG
ATCGACGCGC TCAATCAACA GCTCGGGGGA CAATATCTGT TCGGTGGTCG GGAGGTGACC
CAAGCACCAG TCCTCTCAGG CATTATTCTC CTCAACGGTG ACACGAGCGA TCCAGTGAAG
CCGCTCGCGG GCGTCAAGAC CCTGGTCAAC GAGCAAATCA GGGCTGATCT CGGGACGGGT
TTGGGCCGCT TGACGTTGTC GACCCCGTCA TCCACGAGCA TCGAGGTGCG GGAAGACGCG
GACGCCAGCG CCAGGGCGAA TCTTGGTTTC TCGATCTCCG CCCAACCAAC GTCTTCAGGC
AGTTTCGCGA CGATCAGCTA TGCTGCCAGT CCCCCCGAAG GCGCGACGCT AAGTTTTGCG
AAGCCACCGG CAGCTGATGA TCACTTCCGA GTCGTCGTCA ATCAGGCCGG TGGAGGGCAG
AAGACCTACG ACCTGACGGG CGCCGACCTC GCGGACGTAA GCTCGGCCGC GAACGCAGCG
TCGTCTTTGA AAGCGCTGAT CGGCAACGAC AAGATCGCCA GCGTTCAGAG CGCGTCGCCT
CCCGGTCTCT CTGCATCCTT TGCGAACACG ACCGCGCCGG CGTCGTTCAC GATCAACGTC
GTCGCGCAAC CTGCAAACGG GGATCAGATC CGGATCACGC TTGGGCTTCG CGACGGCACC
ACGACCGCGC TGACCCTCTA CGCGCGAACC AATGCCGACC CGATGTCGCG CACCGATTTC
GTGATCGGCG CGACACCTGC CGAGACCGCG CAGAATTTAT CAAATACGCT TGGGCGAAGT
CTGAAGCAGG CTGCGGAGAC GTCGCTTGCT GCAAGTTCGA CAATCCGCGC AACGCAGGAC
TTCTTCGCAG GGTCGAACGT AGCGGGCCTT GCACCGCGAC GGATCGATTT CACAGGAGCC
GTGCCGGCTT ACGCTTCGAC CTCCTCGGAG ACAACCGTGA TCTGGTACAG AGGCGAGACA
TCGCCCACGG ATCCACGCAC GTCGTTTGCT GTACGTACCG GCGCGACAAG CACGGTTGGA
ATCGGCGCGC GGGCCAACGA GGAGGCGATC CGCACCATTC TGTCGGGGTT CGCGGCCGTC
GCGGTAGGTA GCGCAGCAAG TGCTTTCACA CAGGCCGCAG ATCGCTGGAA AGCACTGGCC
GAGCGATCGG CTTCACTGCT CCCGCAGGAA GAACCGCTGA AGGCCATTTC CACGGAATTC
GGCATCGCGT CCAGCTCTCT GTCGGAGGCG CAAGCGCGGA ATAAGGCGGC CCGGGGGATT
GTTCAGTCGC AAGTGGATGG CATCGAATCG GTTTCCTCGC AGGAGATCGC AGTCAAACTG
CTTGATGTGC AGAATAGATT ACAGACGAGT TACCAGGTGA CCGCGATGCT CCTGAAATTG
TCTTTGGTGA ACTACCTTCG GTAG
|
|---|
| Protein sequence | MTSITAFSAG AYSTSRQTAD LLALKEQVNT LTRQLSSGRV AETYAELGVR RSESLSARGM
LSALDGYDAA ISSVRPRVEL ASASLGRISK MTTTLRNGLT TNRSDADANR AMARDSLNGA
IDALNQQLGG QYLFGGREVT QAPVLSGIIL LNGDTSDPVK PLAGVKTLVN EQIRADLGTG
LGRLTLSTPS STSIEVREDA DASARANLGF SISAQPTSSG SFATISYAAS PPEGATLSFA
KPPAADDHFR VVVNQAGGGQ KTYDLTGADL ADVSSAANAA SSLKALIGND KIASVQSASP
PGLSASFANT TAPASFTINV VAQPANGDQI RITLGLRDGT TTALTLYART NADPMSRTDF
VIGATPAETA QNLSNTLGRS LKQAAETSLA ASSTIRATQD FFAGSNVAGL APRRIDFTGA
VPAYASTSSE TTVIWYRGET SPTDPRTSFA VRTGATSTVG IGARANEEAI RTILSGFAAV
AVGSAASAFT QAADRWKALA ERSASLLPQE EPLKAISTEF GIASSSLSEA QARNKAARGI
VQSQVDGIES VSSQEIAVKL LDVQNRLQTS YQVTAMLLKL SLVNYLR
|
|---|
| |