| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1983 |
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| Symbol | |
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| ID | 3973774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2157911 |
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| End bp | 2160094 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637925094 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_531859 |
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| Protein GI | 90423489 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.454223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA TGAAACGGAT CACCATCCTG CTCGCGGGCG CGGCGACGGT CTCGGCCGTC
GATGCGGCGT GGGCGGGCAA TGACGGCGTC TACGAACTCG GCCAGATCAA CGTCACCGCG
GCGCCCGAGC AAGGCTCGGA ATTCGGCGCC TTCGGCGGCA GCACGATTAG CAACGCGCAG
ACCGAGCGCT TCAACAAGGG CTCGCTCGAC AAGGCGATCG ACCTGGTGCC CGGGGTCAGC
GCCGCCACCA CCGGCACGCA ACGCAACGAG ACCAACATCT ACGTTCACGG CTTCGATCGT
CTGCAGGTGC CGCTGTCGAT CGACGGCGTC CGGATCTATC TGCCGGCCGA CAACCGCCTC
GACTTCTCGC GGTTTCTGAC CGACGACATT TCGCAGATCC AGATCGCCAA GGGCTACGTC
TCGGTGCTGG ATGGCCCGGG CGGGCTCGGC GGCGCGATCA ATCTGGTCAC CAAAAAGCCG
GTCAAGGCGT TCGAAGGCGA ATGGCGCAGC CAAGCTGAAT TCGGCAACGA CGGCGCCTTC
GACGGCTTCA AGAACTACGG TCGCGTCGGC AGCAAGCAGG ACAACTACTA TTTCCAGGCC
AGCGCGGCGT GGCGCAAGCT CGAGGGCTGG GAGCTGCCGT CGAGCTTCTC GCCGACCGCG
ATCGAAAACG GCGGACGTCG CGATTATTCC GCCTCCAACG ATTGGAGCGT CAACCTGAAG
GCCGGCTGGA CGCCGAATCC GGAGGACGAA TATTCGATCA ATTTCATCCG GCAGAACGGC
AAGAAGGACG CGCCGTACAA TGTCGAGCCG ACCGCGTCGC CAAAATACTG GTCGTGGCCG
TATTGGAACG TGCAGATCCT GTCGGCGGCG ACCAAGACGG CAGTCGGCGA TGACGCCTAC
GTCAAGACCC GGACGTTCTG GGAGACCTTC GACAACGCCA TCGACATGTG GGACGACCCC
GCGCAGACCC AGCGCTATTC GTCCAGCGCG GCGCGGTCGA TCTATCAGGA CTGGGCGGTC
GGCAACTCCA TCGAGATCGG CAAGGATTTC GGCACCCTCG ACACCCTCAA GCTGGCGACG
CATATCCGGC GCGACAACCA TTCCGAATGG AACGAGACGT TCACCGACCA ATACGGCTTG
AACGCCACGA CGACGCCGAA GAGCGCGACC TGCAGCACCA GCAAGGCCTC GAGCCACAGC
TGTTTCGTCG AGCCGACCCA GGTCTCCACC GAGGACACCT ATTCGGTCGG GTCGGAAAAC
ACCGTCCACA TCACCCGCGA CTTCGACTGG GTGCAGGGCA TCGGCTATGA CTGGCGGCAT
CTCAGCAAGG CCGAGGACTA TTCCCTCGGA CAATACAAGT CGCCGGTCTA TTACGCGCCG
TACTGGATCA ACTACCGGCT GACCGACGAT TCGGCGTTCA ACTGGCAGAC CGCGGCGATC
TGGCGCTATT CGGACACGGC GAAGCTGTTT CTGAACATCT CCGACCGCAC CCGCTTTCCG
ACGTTGTCGG AGCGGTTCAG CTCGAAATTC GGCACCGCGG CGTCGAATCC GGAATTGGCC
CCGGAACGCG CGGTGAATTA TCAGATCGGC TGGACCAATG CCTTCGCGCC GAACAGCCAG
GTGTCGGTTC TCGGCTACTA CGCGACCGTC ACCGACATGA TCCAGTCGGT CGCGACGGGG
AAATCCTATA CCGACCCGAT CTCCAAGAAG GTGTCGGCGA TCACCCAGAA CCAAAACGTC
GGCGACGGCT ACCGCTACGG CGTCGACTTC GCCGTCGACT ACGCCGTCAA CGCCACGCTG
ATGCTGGGCG GCAACGTCTC CTACATCCAC AACCAGCTCA CCAACCCGAG CGATCCGACG
GTGCAGCAGA CCGGCATTCC GACCGTGAAG GGCATGCTGT ATGCGAGCTA CAGCCCGATC
GAGTCGGTGA CCCTGACGCC GAGCCTGCAA TATGCCGACG AGCGCTGGTC GCAGAAGAAC
CAGGTGATCG CCAACAAATC GGTCAACAGC TACGTCAAGA CCGGCGCCTA TCTGTCGGCC
AATTTCGCCG CCGAATACCG GATGCGCGAC AACCTCACCT GGTCCGGCGG GGTGAAGAAC
ATCTTCGATC AGTACTACGC CCTCGCCTGG GGCTATCCGG AAGCCGGGCG AACCTTCTAT
GTCGGCATGA AGGCGACGTT CTGA
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| Protein sequence | MKTMKRITIL LAGAATVSAV DAAWAGNDGV YELGQINVTA APEQGSEFGA FGGSTISNAQ
TERFNKGSLD KAIDLVPGVS AATTGTQRNE TNIYVHGFDR LQVPLSIDGV RIYLPADNRL
DFSRFLTDDI SQIQIAKGYV SVLDGPGGLG GAINLVTKKP VKAFEGEWRS QAEFGNDGAF
DGFKNYGRVG SKQDNYYFQA SAAWRKLEGW ELPSSFSPTA IENGGRRDYS ASNDWSVNLK
AGWTPNPEDE YSINFIRQNG KKDAPYNVEP TASPKYWSWP YWNVQILSAA TKTAVGDDAY
VKTRTFWETF DNAIDMWDDP AQTQRYSSSA ARSIYQDWAV GNSIEIGKDF GTLDTLKLAT
HIRRDNHSEW NETFTDQYGL NATTTPKSAT CSTSKASSHS CFVEPTQVST EDTYSVGSEN
TVHITRDFDW VQGIGYDWRH LSKAEDYSLG QYKSPVYYAP YWINYRLTDD SAFNWQTAAI
WRYSDTAKLF LNISDRTRFP TLSERFSSKF GTAASNPELA PERAVNYQIG WTNAFAPNSQ
VSVLGYYATV TDMIQSVATG KSYTDPISKK VSAITQNQNV GDGYRYGVDF AVDYAVNATL
MLGGNVSYIH NQLTNPSDPT VQQTGIPTVK GMLYASYSPI ESVTLTPSLQ YADERWSQKN
QVIANKSVNS YVKTGAYLSA NFAAEYRMRD NLTWSGGVKN IFDQYYALAW GYPEAGRTFY
VGMKATF
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