Gene RPC_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1968 
Symbol 
ID3973641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2142008 
End bp2143105 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content68% 
IMG OID637925079 
Producttransport system permease protein 
Protein accessionYP_531844 
Protein GI90423474 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGG CGGAGGCGAT CCACGAGCAA CGCAGCGAGC GCAGCACCCG CGCGTTGCGG 
CCGTCGGCGA TCTTGATTTT ATCCACCCTG CTGGCGGCGC TGCTCGCAAC CGCGCTGATC
GCGCTGACCG TCGGTGCCGC CGGCATTCCG CTGTCGCGGC TTCCCGCCGC ACTCGGAATC
GCCGAACCGG GCTCCGGCAA CACGCTGGCG GTGCGCGATC AACTGGTGCT GTGGTCGATC
CGCGTGCCGC GCATCGTCGC CGCGGCGATG GTCGGAAGTT TGCTGGCGGT GGCTGGCGCA
CTGATGCAGG GCCTGTTTCG CAATCCGCTG GCCGACCCCG CCCTGGTCGG CGTGTCGAGC
GGCGGCGCGT TTGCCGCGGC CACCGCGATC GTGATCACCG ACAGTGCGCT CGGCGCGCAG
CTTCGGTTCA TGCAGAACGA ATTGCTGCCG ATCGCCGCCT TCGTCGGATC GCTGGCGACC
ACTATGATCC TGTATTCGAT CGCAAGCCGC CAAGGCCGCA CCTCGATCGC GATGTTCCTA
CTCGCGGGCC TGGCGATCGC CGCGATCGCC AATGCCGGCA TCGGCGTGCT GGTCTATGTC
GCCGACGATC GGCAGCTGCG CGACATCACA TTCTGGATGT TGGGCTCGCT CAGCGGCGCC
ACCTGGGCCA AGACCGCGAC GATCGCGCCG GTGCTGGCGA TCGCGCTGTT GGTCTGCGCC
GTGATCGCAC GACGGCTCGA CCTGCTGGTA CTGGGCGAAT CCGAGGCGTT TCACAGCGGC
GTCGACGTCG AGCGGTTGAA ACGGTTGTCG ATCGTGCTGA TTTCCGCGAT GACCGGCGTC
GCGGTGGCGA TATGCGGCGT GGTCGGATTC ATCGGCATCA TCGTGCCGCA TCTGTTGCGC
CTGGTGATCG GTCCTTCGCA TCGGCTGTTG CTGCCGGCCT CCGCCTTGCT CGGCGCCGTT
CTGCTGGTCG GCGCCGACAC GCTGGCGCGC ACGCTGGTGG CGCCGGCCGA AATGCCGATC
GGCATCCTCA CCGCCGCGAT CGGCGCGCCG TTCTTCCTGG CGATGTTGTT GCGCCAGCGC
GGGCTGATCG GACTGTGA
 
Protein sequence
MTVAEAIHEQ RSERSTRALR PSAILILSTL LAALLATALI ALTVGAAGIP LSRLPAALGI 
AEPGSGNTLA VRDQLVLWSI RVPRIVAAAM VGSLLAVAGA LMQGLFRNPL ADPALVGVSS
GGAFAAATAI VITDSALGAQ LRFMQNELLP IAAFVGSLAT TMILYSIASR QGRTSIAMFL
LAGLAIAAIA NAGIGVLVYV ADDRQLRDIT FWMLGSLSGA TWAKTATIAP VLAIALLVCA
VIARRLDLLV LGESEAFHSG VDVERLKRLS IVLISAMTGV AVAICGVVGF IGIIVPHLLR
LVIGPSHRLL LPASALLGAV LLVGADTLAR TLVAPAEMPI GILTAAIGAP FFLAMLLRQR
GLIGL