Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1792 |
Symbol | |
ID | 3972057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1946142 |
End bp | 1948202 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637924905 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_531670 |
Protein GI | 90423300 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0554398 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGA AGAGTGCCGG ACGCAAGAGC CAAAGCCCGC GGCCGCCGCG ACGCCGGCGA CCCGCCGCCG CGACCGACGA TGCAACAGTG CAGCCCTCCG CCTCGGGGGC AGAAGCCGCC GCAACGCCCA CGCCGCGGCA GTTCTCGATT CCGCCGGAAT TGGTCGAGAC CATCCTGCTC GGTCCCGCCG ACGACCGCCG CGTGCTGCAG GATTCGCCGC TGCTCGGCGA CGTCTGGGCG GCCTATGCGG CCGATCCCGG ACGGCCGCAG GATCTACTGA TCACCCCGCA CAAGGATGCC ACCGCCGCCG ACGTCGCGTT GCGGGTCTCG AAGGCGGTGA AGGACATCCA TCCGAAGGCG CGGCCGAAGA TCGCCTATCT GCAGGGCCTG GTCGCCGCCA AGCTGACCTT CGAGGAGGTG TTGCGGGTGG TGGTGCCGCT GACGCAATGG TGGTTTCAGC CGCAGGTGCA GGGCCGGATC GGCGGCACCG CGCCCGAGGT GCTCACGCAA CTGCTCGACC TCGACGCCGG CAAACCGCGC GGCGATGCGG CGGCCCTGAC CATCACTTCG CTCGACCGCT ACATCGCGCT CGCTGGACTG ATCTATTGGA CCGAGCGGCA GCCGCGGCCG CAGGATTTCG ACGACCCGGC GACGCCGCTG GACAAACGGC CGAAGCTGGA GATCGCGCAG GCGTTGCGTC TCTATAAAAA TCATATCCCC GAGATCATCA GCGGCATGGT CGAACTCTAC GAAACGGTGC AGGCCGCAAG CCAGGCGACC GCGGCGAAAG CGCCCAGCGA CCCGGAGGAT GATCCCGACA GCAATCCGGG TCTGATCTTT CAGGTCTCGC TCAATCGCAA GGCGGAGTTG GCGCTGGATC GCTCGGTTCC GTCGGTCAAG GCCGATGCGG TGCACGCGTT GTTTCGGGTG AAGTGCAAGT CGATCATCTG GGCGGTGCTG GATTCCGGGA TCGATGGTAC CCACCCGGCG TTCCAGGTGG CGCTGAACAA ACCGAAACCC GGCGAGCCGC CGATCCCGTC ATCGCGGGTG CGCAAGACCT TCGACTTCAG CAAGATCCGC GAGATCGTCA GCAACGACAT CGACGATCTC GACGATGTCG AATGCCAGGA GCTTGCCGCG GCGACCGGAC GGCCGAAAGC TGAGGTGGTC AAATATCTGA AGAAGGTGGC AACCGACGCC GGCGCCGGCA AGCCGATCGA CTGGGGCATC GTCGAGAAGC TGATCACGCT GAAGCAGCCT GCGCCGCCGC CGGCCAGTTC GCACGGCACC CACGTTGCCG GCATTCTCGG CGCCGACAAG ACCGGCGGCG AACTGCCGGA GGGCGGCGGC CTCGCCGACG GCATGTGCCC GGATATCCGG CTGTATGATT TCCGCGTGCT CGGCAAGAGT TTGGAAGACA CCGAATTCGC CATCATCGCG GCGCTGCAAT ACATCCGCTA CGTCAACGAG CGGCACAACT ACATCATCAT CCACGGCGCC AATCTCAGCC TGTCGATCCC GCACAACGTC CGCAACTACG CCTGCGGGCG CACCCCGGTG TGCAACGAAT GCGAACGGCT GGTCGACAGC GGCGTGGTGG TGGTCGCCGC CGCCGGCAAC CGCGGCTTCC AGAAATTCGA AACCAACGAG GGCATCTTCG AGAATTACGC GGCGTTCAGC ATCACCGATC CCGGCAATGG CGACGGCGTC ATCACCGTCG GCTCGACCCA CGGCAACTGG CCGCAGACCT ACGGCGTCAG CTTCTTCTCC AGCCGCGGGC CGACCGGCGA CGGCCGGCTG AAGCCGGATC TGGTGGCCCC CGGCGAGCGG GTGCAGTCCA CGGTGCTCGA CCACGGCTGG GGCGCCGAAT CCGGCACCAG CATGGCGGCG CCGCACGTCT CCGGCGCCGC GGCGATGTTG CTGGCGCGCT ACGAGGAATT GATCGGACAA CCGCGCCGGG TCAAGCGCAT CCTGTGCGAC AGCGCCACCG ATCTCGGGCG GGAAAAGACC TTTCAGGGCC ACGGCATGCT CGACGTGCTG CGGGCCTTTC AATCGATTTG A
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Protein sequence | MAKKSAGRKS QSPRPPRRRR PAAATDDATV QPSASGAEAA ATPTPRQFSI PPELVETILL GPADDRRVLQ DSPLLGDVWA AYAADPGRPQ DLLITPHKDA TAADVALRVS KAVKDIHPKA RPKIAYLQGL VAAKLTFEEV LRVVVPLTQW WFQPQVQGRI GGTAPEVLTQ LLDLDAGKPR GDAAALTITS LDRYIALAGL IYWTERQPRP QDFDDPATPL DKRPKLEIAQ ALRLYKNHIP EIISGMVELY ETVQAASQAT AAKAPSDPED DPDSNPGLIF QVSLNRKAEL ALDRSVPSVK ADAVHALFRV KCKSIIWAVL DSGIDGTHPA FQVALNKPKP GEPPIPSSRV RKTFDFSKIR EIVSNDIDDL DDVECQELAA ATGRPKAEVV KYLKKVATDA GAGKPIDWGI VEKLITLKQP APPPASSHGT HVAGILGADK TGGELPEGGG LADGMCPDIR LYDFRVLGKS LEDTEFAIIA ALQYIRYVNE RHNYIIIHGA NLSLSIPHNV RNYACGRTPV CNECERLVDS GVVVVAAAGN RGFQKFETNE GIFENYAAFS ITDPGNGDGV ITVGSTHGNW PQTYGVSFFS SRGPTGDGRL KPDLVAPGER VQSTVLDHGW GAESGTSMAA PHVSGAAAML LARYEELIGQ PRRVKRILCD SATDLGREKT FQGHGMLDVL RAFQSI
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