Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1710 |
Symbol | |
ID | 3972363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1853957 |
End bp | 1855306 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924823 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_531588 |
Protein GI | 90423218 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.140977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0321459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA CCAGCACGAT TGCCGAGCGC CTCAGATTCA ATTCGATCGA TCAGGAAACC ATCGCCGCCT TGCGGGCGGG GAAGGCCTTC GTGTTGGCCG AGCTGGAGCC GATCCTGGAC CGGTTCTATC AGCACATCGC CCGTTTCCCG GAAGTGTCGG CGCATTTCAA AACGCCGGAG CGGATGGTGC ATGCCCGCAA GATGCAGATC AAGCATTGGG GCGTGATCCT CGACGGCAAG TTCGACGAGG CCTATGAGGC GTCGGTCACC AAGGTCGGCG AGGTTCACAA CAAGCTCGGT CTGGAGCCGC GTTGGTACAT CGGCGGTTAC AACGCGCTGA TATCCGGGTT GATGGAGGCG GTGGCGCTGC GGATGCCGAC CGGACGGTTC GACCGCCGCG CGCTGCAAAA GAAGACCGCG TTGCAGCAGG CGATCATCAA GGCGTCGATG CTGGACATGG ACTACGCGAT CGCGGTCTAC ATCGAAGCCG GGCGGCGCGA CCGCCGCACC ATGCTGCAGA AGCTCGCCGG CGAATTCGAA ACGTCGATCG GCGGGGTGGT CAACGTCGTG GCGTCCGCCG CGACAGAACT GCAGGCCTCC GCGGAAACCA TGTCCGGATC GGCCAAGGCC GCGGCCTCGC GGTCCGAAAT AGTGAACAGC GCCTCGAAGG ACGCCTCCAG GAGCGTGCAG TCGGTGGCCT CGGCCACCGA ACAACTCACC AGCTCGACGC TGGAAATCTC CCGCCAGGTG AACGAATCGG CGCGGATCGC CGGCGGCGCC GCGCGCGACG CCGATCAGAC CGCGGCGACC ATGAAGCGGC TGTCGGACGG CGCGCAGAAG ATCGGCGCGG TGGTCGATTT GATCAACAAC ATCGCGGCGC AGACCAATCT GCTGGCGCTC AACGCCACCA TCGAGGCGGC GCGCGCCGGC GACGCCGGGC GCGGCTTCGC CGTGGTGGCG CAGGAAGTGA AGTCGCTCGC CGAACAGACC GCCAAAGCCA CCGCCGAGAT CGCCGGCCAG GTCGGCGACA TCCAGAGTTC GACCGGCGAA TCCGTCGCGG CGATCGAGAA CATCACCGGC GTGATCCGCG CGGTGAACGA GATCTCCTCG ACGATCGCCG CCGCGGTGGA GCAGCAAAGC GCCGCAACCG CCGAGATCTC GCGCAGCATC CAAGAGGCCG CGCGCGGCAC CGGCGAGGTG TCGACCAATA TCGCCGGCAT CACCGCCTCG GCGGGCGACA CCGGCGCCGC GGCCGGCGAG GTGCTGAACG CGGCGTCCGA ACTGTCGCGG CAGTCGGAGA AGCTGCGCGG GGAAGTGACC TGCTTCCTGC TCACCGTTCG GGCTGCGTAA
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Protein sequence | MSNTSTIAER LRFNSIDQET IAALRAGKAF VLAELEPILD RFYQHIARFP EVSAHFKTPE RMVHARKMQI KHWGVILDGK FDEAYEASVT KVGEVHNKLG LEPRWYIGGY NALISGLMEA VALRMPTGRF DRRALQKKTA LQQAIIKASM LDMDYAIAVY IEAGRRDRRT MLQKLAGEFE TSIGGVVNVV ASAATELQAS AETMSGSAKA AASRSEIVNS ASKDASRSVQ SVASATEQLT SSTLEISRQV NESARIAGGA ARDADQTAAT MKRLSDGAQK IGAVVDLINN IAAQTNLLAL NATIEAARAG DAGRGFAVVA QEVKSLAEQT AKATAEIAGQ VGDIQSSTGE SVAAIENITG VIRAVNEISS TIAAAVEQQS AATAEISRSI QEAARGTGEV STNIAGITAS AGDTGAAAGE VLNAASELSR QSEKLRGEVT CFLLTVRAA
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