Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1679 |
Symbol | |
ID | 3972739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1813799 |
End bp | 1814677 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637924793 |
Product | LysR family transcriptional regulator |
Protein accession | YP_531558 |
Protein GI | 90423188 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGG ATCAGCTTCG CATCTTCATC GCGGTCGCCG ACCTGCAACA CGTCACCCGC GCCGCGAGCG AGCTCAATCT GACGCAATCG GCGACCAGTT CGGCGATCGC CGCCCTGGAA CAGCGCTACG CGATCAAGCT GTTCGATCGG GTCGGCCGCG GCATCGCCTT GACCCAGACC GGCCGCGCCT TTCTCGGCGA AGCCCGCGCC GTGGTCGCCC GCGCCGACGC CGCGGTGCAG GTGCTGAACG ATCTCGCCGG GTTGAAGCGC GGCACGCTGG CGTTGGCGGC GAGCCAGACC GTGGCGAACT ACTGGCTGCC GCCGCGGCTG CAGGCGTTCC GCAAGCGCCA TCCCGGCATC GCCGTGCGGG TGACCATCGC CAACACCGAG CAGGTGGCGG CCGCGGTGCA CGAAGGCCGC GCCGATCTCG GCTTCGTCGA GGGCCCGGTC GACGATCCGC TGCTGGCGGC ACGCCGCATC GACGGCGATA CGCTGCTGAT CGTGGTCGGC ACCAAGCATC CTTGGGCGGG GCAGCGCCGG ATCGCGCCCG CGCGGTTGAC CAGCAGCGGC TGGGTGCTGC GCGAGCCCGG CTCCGGCACC CGCGCCATCT TCGAGGCGGC GTTACGCAAG GCCGGCGTCA AGCCGAGCGA ATTGCGCGTC GAACTGGAGC TGCCGTCCAA CGAAGCGGTG CGCGCCGCGG TGGAAGCCGG CGACTGCGCC ACCGCGATCT CCGATCTGGT GGCGGCGCCG GGGCTGTCGG CCGGCACCCT GCACCAGATC AAATTCGAGC TGCCGCGCCG CGCATTTTTC GTGCTGCGGC ACAAGCAGCA CGCCGCCAGC CGCGCCGAAA CCGCGCTGCT GGAGTCGTTC CTGCCGTGA
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Protein sequence | MTLDQLRIFI AVADLQHVTR AASELNLTQS ATSSAIAALE QRYAIKLFDR VGRGIALTQT GRAFLGEARA VVARADAAVQ VLNDLAGLKR GTLALAASQT VANYWLPPRL QAFRKRHPGI AVRVTIANTE QVAAAVHEGR ADLGFVEGPV DDPLLAARRI DGDTLLIVVG TKHPWAGQRR IAPARLTSSG WVLREPGSGT RAIFEAALRK AGVKPSELRV ELELPSNEAV RAAVEAGDCA TAISDLVAAP GLSAGTLHQI KFELPRRAFF VLRHKQHAAS RAETALLESF LP
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