Gene RPC_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1678 
Symbol 
ID3972738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1812751 
End bp1813563 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content67% 
IMG OID637924792 
Productenoyl-CoA hydratase 
Protein accessionYP_531557 
Protein GI90423187 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC GCGTTGCGGT GACGATCAGC GACGGCGTCG CCGATGTCCG GCTGGTGCGC 
GCCGACAAGA TGAATGCGCT CGATGCCGCA ATGTTCGAGG CCTTGGTCGC CACCACCGCG
CGGCTCGCCG GCGAGCAGGG CGTTCGCGCG GTGGTGCTGA GCGGCGAGGG CCGGGCGTTC
TGCGCCGGGC TCGACATGGG GCGTTTTGCC GCGATGAATG AGAACGGCGG CCACGGCATC
TTGGGCGGGC AAGCGCGCGA TCTCACCGTG CGCAGCCATG GCCTCGCCAA TTTCGCCCAG
CAGGCGGTGT GGGGGTTTCG GCAATTGCCG GTGCCGGTGA TCGCCGCGGT GCATGGCGTG
GCGTTCGGCG GCGGCTTCCA GCTGGCACTC GGCGCCGATA TCCGGCTGCT GGCGCCGGAT
GCGAAAATGT CGATCATGGA AATCAAATGG GGGCTGGTGC CGGACATGGC GGGCACCCCG
ATCCTGGCCA GCCTGGTGCG CGACGATATT CTGCGCGAAC TCACTTATAC GGGCCGGATG
TTTTCGGCGC AGGAGGCGCT GAGCTACGGC CTGGCGACCA AGATCGTCGA TGATCCCCGC
GCGGCCGCGC TGGAGATGGC GATCGAGATT GCCGGCAGGA GCCCGGACGC AATCCGCGCG
GCGAAACGGC TGTACAACAA GCTCTCGGTC GATCCTGGGC CGGCGCTGCT CGCGGAGTCG
CTCGAACAGC AGCAGCTGAT CGGTTCAAAG AACCAGATCG AGGCGGTGCG CGCCAATATC
GAAAAGCGCG CGCCAAGGTT CGTGGATGGG TGA
 
Protein sequence
MNDRVAVTIS DGVADVRLVR ADKMNALDAA MFEALVATTA RLAGEQGVRA VVLSGEGRAF 
CAGLDMGRFA AMNENGGHGI LGGQARDLTV RSHGLANFAQ QAVWGFRQLP VPVIAAVHGV
AFGGGFQLAL GADIRLLAPD AKMSIMEIKW GLVPDMAGTP ILASLVRDDI LRELTYTGRM
FSAQEALSYG LATKIVDDPR AAALEMAIEI AGRSPDAIRA AKRLYNKLSV DPGPALLAES
LEQQQLIGSK NQIEAVRANI EKRAPRFVDG