Gene RPC_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1662 
Symbol 
ID3972585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1794683 
End bp1795414 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID637924777 
ProductABC transporter related 
Protein accessionYP_531542 
Protein GI90423172 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAT TGTTGGAAAC CAAAGGCGTC TGGCAGCGCT TCGGCGGCCT GGTTGCGAAT 
AGCGACATCT CGATCGCGGT CGAGCCCGGC GAGATCGTCG GACTGATCGG GCCGAACGGC
GCCGGCAAAT CGACGCTGTT CAACCTGATC GCCGGCGTGC TGCCGCCGAC CCAAGGGTCG
ATCCTGTTCA ACGGCGAAGA CGTCACCCGG CTGCCGGCGG CGCAACGCTG CCAGCGCGGC
ATCGCCCGCA CCTTCCAGGT GGTGAAGAGC TTCGAGACCA TGACGGTGAT CGATAATGTC
GTGGTTGGCG CCTTGATCCG CACCACGGTG ATGCGCGAGG CCCGCCGCAA GGCCTATGAG
GTCTTGGAAT TCACCGGGCT CGCGGCGCGC GCCAACGTGC TGGCCAGCGA ACTCATTCCC
TCGGAGAAGC GCCGGCTCGA GGTCGCCCGC GCGCTCGCCA CCGAGCCGAA GCTGCTCTTG
CTCGACGAGG TGTTGACTGG CTTGACGCCG CTCGAGGCGC AGACCGGCGT CGAACTGGTG
CGCCGGGTGC GCGCCACCGG CGTCACCGTG TTGATGGTGG AACATGTCAT GGAAATCGTA
ATGCCGCTGG TCGATCGCGC CATCGTGCTC GATCTCGGCA AGGTGCTGGT CGAAGGCAAG
CCGGCCGATA TCGTTCGCGA TCCGAAAGTT ATCAGCGCCT ATTTGGGAGA TCGTCATGCT
GTCGGTGCAT GA
 
Protein sequence
MTALLETKGV WQRFGGLVAN SDISIAVEPG EIVGLIGPNG AGKSTLFNLI AGVLPPTQGS 
ILFNGEDVTR LPAAQRCQRG IARTFQVVKS FETMTVIDNV VVGALIRTTV MREARRKAYE
VLEFTGLAAR ANVLASELIP SEKRRLEVAR ALATEPKLLL LDEVLTGLTP LEAQTGVELV
RRVRATGVTV LMVEHVMEIV MPLVDRAIVL DLGKVLVEGK PADIVRDPKV ISAYLGDRHA
VGA