Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1662 |
Symbol | |
ID | 3972585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1794683 |
End bp | 1795414 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637924777 |
Product | ABC transporter related |
Protein accession | YP_531542 |
Protein GI | 90423172 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAT TGTTGGAAAC CAAAGGCGTC TGGCAGCGCT TCGGCGGCCT GGTTGCGAAT AGCGACATCT CGATCGCGGT CGAGCCCGGC GAGATCGTCG GACTGATCGG GCCGAACGGC GCCGGCAAAT CGACGCTGTT CAACCTGATC GCCGGCGTGC TGCCGCCGAC CCAAGGGTCG ATCCTGTTCA ACGGCGAAGA CGTCACCCGG CTGCCGGCGG CGCAACGCTG CCAGCGCGGC ATCGCCCGCA CCTTCCAGGT GGTGAAGAGC TTCGAGACCA TGACGGTGAT CGATAATGTC GTGGTTGGCG CCTTGATCCG CACCACGGTG ATGCGCGAGG CCCGCCGCAA GGCCTATGAG GTCTTGGAAT TCACCGGGCT CGCGGCGCGC GCCAACGTGC TGGCCAGCGA ACTCATTCCC TCGGAGAAGC GCCGGCTCGA GGTCGCCCGC GCGCTCGCCA CCGAGCCGAA GCTGCTCTTG CTCGACGAGG TGTTGACTGG CTTGACGCCG CTCGAGGCGC AGACCGGCGT CGAACTGGTG CGCCGGGTGC GCGCCACCGG CGTCACCGTG TTGATGGTGG AACATGTCAT GGAAATCGTA ATGCCGCTGG TCGATCGCGC CATCGTGCTC GATCTCGGCA AGGTGCTGGT CGAAGGCAAG CCGGCCGATA TCGTTCGCGA TCCGAAAGTT ATCAGCGCCT ATTTGGGAGA TCGTCATGCT GTCGGTGCAT GA
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Protein sequence | MTALLETKGV WQRFGGLVAN SDISIAVEPG EIVGLIGPNG AGKSTLFNLI AGVLPPTQGS ILFNGEDVTR LPAAQRCQRG IARTFQVVKS FETMTVIDNV VVGALIRTTV MREARRKAYE VLEFTGLAAR ANVLASELIP SEKRRLEVAR ALATEPKLLL LDEVLTGLTP LEAQTGVELV RRVRATGVTV LMVEHVMEIV MPLVDRAIVL DLGKVLVEGK PADIVRDPKV ISAYLGDRHA VGA
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