| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1600 |
|---|
| Symbol | |
|---|
| ID | 3973139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1734752 |
|---|
| End bp | 1735294 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637924716 |
|---|
| Product | Appr-1-p processing |
|---|
| Protein accession | YP_531481 |
|---|
| Protein GI | 90423111 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.799444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTGATCCGGC AGCTCGGCCC GGTCCTCGTT GAGGTCGTCG TCGCGGACAT CACCACGCTC
CGCCTCGACG CCATCGTCAA TGCGGCGAAC GCCTCGCTGC AGGGCGGCGG CGGGGTCGAT
GGCGCGATCC ATCGCGCCGC CGGCCCGCAA TTGCTCGCCG AATGTCGCGC CCTCAACGGC
TGCGACACCG GCGACGCCAA GATCACCCAG GGTTACCGTC TGCCGGCGCG GCACGTTATC
CACGCGGTGG GGCCGGTGTG GCGCGGCGGC GCGCAGGGCG AAGATCAGGC GCTGGCCTCG
TGCTACCGCC GCGCGGTGGC GCTGTGTCAG AGCCATGGGT TGACGTCGAT CGCGTTTCCG
GCGATCTCCA CCGGCATCTA CGGCTTTCCG CCGGACCGCG CCGCCGTCAT CGCCATCGCC
GCCACGATCG ACGCGCTGGC AACGGCGCCG GTGCTGCGCC GGGTGGTCTA TTGCTGCTTT
TCGGAGATCA GCGCACGGCT GCACGAGGCG GAGCTGGCGG GTGCCCGGAT GTCTGTCGAA
TGA
|
|---|
| Protein sequence | MIRQLGPVLV EVVVADITTL RLDAIVNAAN ASLQGGGGVD GAIHRAAGPQ LLAECRALNG
CDTGDAKITQ GYRLPARHVI HAVGPVWRGG AQGEDQALAS CYRRAVALCQ SHGLTSIAFP
AISTGIYGFP PDRAAVIAIA ATIDALATAP VLRRVVYCCF SEISARLHEA ELAGARMSVE
|
|---|
| |