Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1434 |
Symbol | |
ID | 3973702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1558619 |
End bp | 1559623 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637924549 |
Product | oxidoreductase-like |
Protein accession | YP_531315 |
Protein GI | 90422945 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.367315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCCC GCGAATTCGA CTTGGGCAAG GAACGCGCGT TGCGCGTTGG CGTCGTCGGC GCCGGTGTGA TGGGCACCAA TCACGGCCGG GTGCTGGCCG GCTTGCCCGG CATCGTGCTG GTCGGGATCG TCGATCCGCT GCCCGATCAT CGCGACCGCG CCAGCCAGCT GATCGGCTGT CCGACCTTCG CCACGCTCGA TGAACTATGC GAGGCCGGCG TCGATGCGGT GACCATCGCG GCGCCGACCC ATCTGCATCA TGACGTCGCC ATCGCCTGTA TCAATCGCGG CATTCATGTG CTGGTCGAAA AGCCGGTGGC GTCGACGGTG CAGGAAGGCC GCGAGATCGT TGCTGCCGCC AAGCGCGCCG GCGTGACGCT GATGGTCGGC CATGTCGAGC GCTTCAATCC GGCGGTGGCC GCGATCAAGC ACGCCATCGA AGGCGAAGAT ATTCTGTCGA TCGGCATCAC CCGGGTCGGG CCGTTTCCGC CGCGGATGTC CAATGTCGGC GTGGTGATCG ATCTTGCGGT GCACGACATC GATCTGATCC GCTGGTTCAC CGAATCCGAA ATCATCGACG TGCAGCCGCA GCTGTCCAGC GCCATCGCCG AGCGCGAAGA TATCGCGCTG TTGCAGTTCC GCACCGCCTC CGGCGTGCTG GCGCATATCA ACACCAACTG GCTGACGCCG TTCAAGGCGC GCAACGTCAC CATCGCCACC CGCGGCAAAT ACGTGCAGGG CGATCTGTTG ACCCGTCAGG TCACCGAATG CTTCGGCTTC CAGCCCGACG GCAGCTACTC GATGCGGCAT CTGCCGGTCG GTCACGACGA ACCGCTGCGC GCCGAGCTGA TCGCCTTCGT CGAGTCGGTT CGGACTGGCG GCCCCGCCGC GGTGACCGGC GAAGAGGGCG TCGCCAGCCT GGAAATCGCG ATCAAGTGCC TGGAGTCGCG CGCCGTGCCT GCCGCTGCGA CCTTCCGCAA GGCGCCGCGC CGCGCCGCCG GCTAA
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Protein sequence | MISREFDLGK ERALRVGVVG AGVMGTNHGR VLAGLPGIVL VGIVDPLPDH RDRASQLIGC PTFATLDELC EAGVDAVTIA APTHLHHDVA IACINRGIHV LVEKPVASTV QEGREIVAAA KRAGVTLMVG HVERFNPAVA AIKHAIEGED ILSIGITRVG PFPPRMSNVG VVIDLAVHDI DLIRWFTESE IIDVQPQLSS AIAEREDIAL LQFRTASGVL AHINTNWLTP FKARNVTIAT RGKYVQGDLL TRQVTECFGF QPDGSYSMRH LPVGHDEPLR AELIAFVESV RTGGPAAVTG EEGVASLEIA IKCLESRAVP AAATFRKAPR RAAG
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