Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1411 |
Symbol | |
ID | 3973062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1538110 |
End bp | 1538886 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637924526 |
Product | hypothetical protein |
Protein accession | YP_531292 |
Protein GI | 90422922 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0881104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.275348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCA CCTCGCCGCT GCTGTCGGCC GTGCCGGGCC TGCGTCACGC CTTCTTCACC CGCGAAGGCG GCGTCTCCGA GGGGATTTAC GCCGGACTCA ACGCCGGGGT CGGGTCGCAG GACGACCCCG CCCACGTCGC GGAAAACCGC CGCCGCATGG CCCAGGTAAT GGGCGTCGCG CCGGAGCGCT TTCTCACCGC CTACCAAATT CATTCGCCCG ACGTGGTGGT GGCGGAAGCG CCGTGGGACA GCGCGTCACG GCCGCGGGTC GATGCGATCG TGACCCGCGT CGAGGGCCTG GCGATCGGAG CCACCGCCGC GGATTGCGGC CCGGTGCTGC TGGTCGATCC GGACGCGCGG GTGATCGGCG CTGCTCATGC CGGCTGGAAA GGCGCGCTGA CCGGCGTCGT GGAATCCACC GTCGCCGCGA TGCAGAACCT GGGAGCGTCG CGGCAAAACA TCCGCACCGC GATCGGGCCG CTGATCCGGC AGCAGAGTTA TGAGGTGGGC AGCGAATTCG TCGAGCGCTT CGTCGCCGCC GATCCCGGCT ATGCGCGGTT TTTCATCGCC TCGTCCCGCG CGGGCCATGC CATGTTCGAT CTCGCCGGGC TGATCCGGCT GCGGCTCGAG CAGGCCGGCG TCGGCGCGAT CGACGACATC GGCCTCGATA CCTATCCGAA CGAGAAATTT TTCAGCTACC GCCGCTCTGT CCACCGCAAA GAGCCGGATT ACGGCCGTCA CGTCCACGCC ATCGCGCTCC ACGCGCGGCC GGTCTAA
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Protein sequence | MTITSPLLSA VPGLRHAFFT REGGVSEGIY AGLNAGVGSQ DDPAHVAENR RRMAQVMGVA PERFLTAYQI HSPDVVVAEA PWDSASRPRV DAIVTRVEGL AIGATAADCG PVLLVDPDAR VIGAAHAGWK GALTGVVEST VAAMQNLGAS RQNIRTAIGP LIRQQSYEVG SEFVERFVAA DPGYARFFIA SSRAGHAMFD LAGLIRLRLE QAGVGAIDDI GLDTYPNEKF FSYRRSVHRK EPDYGRHVHA IALHARPV
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