Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1362 |
Symbol | |
ID | 3972651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1486806 |
End bp | 1487885 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637924477 |
Product | ABC transporter related |
Protein accession | YP_531243 |
Protein GI | 90422873 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.21924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTGT CGCTGCAAAA CGTCAGCCGC AGCATCGACG GCGTGCCGGC GATCCGCGAC GTCTCGCTGA CGCTGCAGCG CGGCACGCTC ACCGTGCTGC TCGGGCCGAC GCTGTCCGGC AAGACCTCGA TCATGCGGCT GCTCGCGGGG CTCGACAAGC CGAGCCACGG CAAGGTTCTG GTCGACGGAA AAGACGTCAC CGGCGTCGAC GTCCGCAAGC GCTCGGTGGC GATGGTGTAT CAGCAGTTCA TCAACTACCC CTCGCTCAGC GTTTACGAGA ACATCGCTTC GCCCTTGCGG GTGCAGCGCC AGCCGCGCGC CGAGATCGAG CGCAAGGTGC AGGAGGCGGC GAAGTTGTTG AAGCTCGAGC CGTATCTGAA GCGCACGCCG ATGCAACTGT CCGGCGGACA GCAGCAGCGC ACCGCGATCG CGCGCGCGCT GGTCAAGGGC GCCGACCTGG TGCTGCTCGA CGAGCCGCTG GCTAATCTCG ACTACAAGCT GCGCGAGGAA CTGCGCGTCG ACCTGCCGCG CATTTTTGAG GCGTCGGGCG CGATCTTCGT CTACGCCACC ACCGAGCCGT CGGAGGCGCT GCTGCTCGGC GGCAACACCA TCTGCATGTG GGAGGGCCTG GCGCTGCAGA ACGGCGTCAC CGCGCAGGTC TATCGCCGCC CCGAGAGCTT GCGCGTCGCG CAGGTGTTCT CCGATCCGCC GCTCAATCTG GTGAACGTCG AGAAGAAGAA CGGCGCGGTC GACTATGCCG GCGGCGGCTC TGGCCCCGCG ACCGGAGTGT TCGCTTCCCT CGGAGATGGC GCCTACCGGG TCGGTTTCCG CGCCCATCAG CTCGAGGTCG CCAGCGGCCA CGCCGACCGC CACGCCTTCG CCACCACGGT GTCGGTGACC GAGATCACCG GCTCGGAGAG CTTCGTGCAT CTGAAGCGCG GCGACACCAA CTGGGTCGCG GTGCTGCAGG GCGTGCACGA ATTCCTGCCC GGGCAGCCGC TGGAAGCGGT GCTCGATCCC GCCAATCTGT TCGTGTTCGA CGCCGCCGAC CGCCTGGTCG CGGCACCTTC GACGATGTGA
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Protein sequence | MSVSLQNVSR SIDGVPAIRD VSLTLQRGTL TVLLGPTLSG KTSIMRLLAG LDKPSHGKVL VDGKDVTGVD VRKRSVAMVY QQFINYPSLS VYENIASPLR VQRQPRAEIE RKVQEAAKLL KLEPYLKRTP MQLSGGQQQR TAIARALVKG ADLVLLDEPL ANLDYKLREE LRVDLPRIFE ASGAIFVYAT TEPSEALLLG GNTICMWEGL ALQNGVTAQV YRRPESLRVA QVFSDPPLNL VNVEKKNGAV DYAGGGSGPA TGVFASLGDG AYRVGFRAHQ LEVASGHADR HAFATTVSVT EITGSESFVH LKRGDTNWVA VLQGVHEFLP GQPLEAVLDP ANLFVFDAAD RLVAAPSTM
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