Gene RPC_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1340 
Symbol 
ID3973818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1462574 
End bp1463185 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID637924455 
Producthypothetical protein 
Protein accessionYP_531221 
Protein GI90422851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.431234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAT CGAGTCGCCC GATGGTCGCG ATCATTTCCG CCGGTTGCCT ATCGCTGTGC 
TTTGCCCTGG CGCTCACCAT GGGGCCGGCA GGTAGCGCGC TCGCGCAGCA GCCGAAGGCC
GCCGCCAAGC AGGGCGCGCC CGCCGCACAA CCAGCCGAGT CACCGCAGAT CAAGCAGATC
GCGCTCACCG ACAAACAGAT CGAGCAGCTG TTGGCGGCGC AACCCGAGAT GGATGCGATC
GCCGCCAAGC TGCCGGACAA GCCCGCCGCC AAGCCGGAGG CGAACATCGA CGCGCAATTC
GAGGAGGTCG CCAAGAAGCA CGGCTTTGCC GGCTACGCCG AGTATAACGA CGTCGTCGAC
AATATTGGCC TGGTGCTGGC CGGCTTCGAT CCGCAGAGCA AGAGCTATGT CGGGGCTGAA
GCGGTGCTGA AATCGCAGAT CGCCGCGGTG CGGGCCGACA AGAAGATCCC CGCCAAGGAG
AAAAAGGAAG TGCTCGGCGA ACTTAACGCG GCGTTGAAGA CGCCGGCGCC GACGATCGAG
AACAAGGCCA ATATCGACGT GGTCGCCAGG TCTTACGACA AGCTCACCGC GGTGCTGCAG
CAGAGCGATT AG
 
Protein sequence
MPASSRPMVA IISAGCLSLC FALALTMGPA GSALAQQPKA AAKQGAPAAQ PAESPQIKQI 
ALTDKQIEQL LAAQPEMDAI AAKLPDKPAA KPEANIDAQF EEVAKKHGFA GYAEYNDVVD
NIGLVLAGFD PQSKSYVGAE AVLKSQIAAV RADKKIPAKE KKEVLGELNA ALKTPAPTIE
NKANIDVVAR SYDKLTAVLQ QSD