| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1315 |
|---|
| Symbol | bchH |
|---|
| ID | 3974054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1429934 |
|---|
| End bp | 1433677 |
|---|
| Gene Length | 3744 bp |
|---|
| Protein Length | 1247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637924425 |
|---|
| Product | magnesium chelatase subunit H |
|---|
| Protein accession | YP_531196 |
|---|
| Protein GI | 90422826 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
|---|
| TIGRFAM ID | [TIGR02025] magnesium chelatase, H subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.285643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAGC GCACTTCTCC CGCTGACGCT ACGCCGTTAC GTGTCGTCAT CGTTACGATG
GACAGTCATC TGTCCGGCGC GGCCGCCCGC GCGCGTAATC TGTTGCGGCG TGATTATCCC
GGGATCGAAC TGACGGTGCA TTCCGCCGAC GAGTGGGGCA CCGACGAGGG CGCGCTCGGC
CGTTGCTACG CCGATATTGC CACCGGCGAC ATCGTGATCG CCACCATGCT GTTCCTCGAC
GACCACGTTC GCGCGGTGAT GCCGGCGCTG CTGGCGCGTC GCCTGGACTG CGACGCCATG
ATCTGCTGCA TGTCGGCGGC CGAGGTGGTG AAGCTGACCC GGGTCGGCAA GTTCGACATG
AGCGCCGAGG CGCTCGGCGC CATCAACTGG CTGAAGAAGC TGCGCGGCAA GAAGGAATCC
GGTCCGGCCG GCAAGGGCGA GATGAAGATG CTGCGGCAGC TGCCGAAGCT GCTGCGCTTC
ATTCCCGGCA CCGCGCAAGA TATGCGCGCC TACTTCCTGA CGCTGCAATA TTGGCTCGCC
GGCTCCGAGC AGAACATCGC CAACATGGTG CGCTTGCTGG TCGATCGCTA CGCCAGCGGC
CCGCGCAAGG GCCTGCGCGG CATCGCCAAG GCCGAGCCGC CGGTCGAATA CGCCGATATC
GGCGTGTATC ACCCGCGGAT GAAGGGCCGG ATCGCGGAAT CCGTCGATAA GCTGCCGACC
ATTCCGAACC AGCAGGGCAC CGTCGGCGTG CTGTTGTTGC GCTCCTATCT ACTGGCCGGC
AATTCCGGTC ACTATGACGG CATGATCGAG GCGTTCGAGG CCAAGGGGCT GCGCGTCATC
GCGGCGTTCG CCAGCGGTCT CGATCAGCGT CCGGCGATCG AAAAGTTCTT CATGAAGGAC
GGCCGCAGCG CCGTCGATGC GGTGGTTTCA CTGACCGGCT TCTCGCTGGT CGGCGGCCCT
GCCTACAACG ATTCCAAGGC GGCCGAAGAC ATTCTGGCGA CGCTCGACGT GCCGTATCTG
TCGGCGCATC CGGTGGAATT CCAGACTCTC GAACAATGGG GCGCCTCCGA CCGCGGCTTG
ATGCCGGTCG AGAGCACCAT CATGGTGGCG ATCCCCGAAC TCGACGGCTG CACCGGCCCG
ATGGTCTATG GCGGCCGTTC CGACGCCGGC GAAGTGCCGT GCGCGGGCTG CGATCGGGCT
TGCAAGTTCA CCCGTTCGGA AAACGGCGGC GACATGTACA CCTGCGCCGA ACGCGCCGAG
GTGTTGGCGT CCCGCACCGC CAAGCTGGTG GCTTTGCGCC GCAGCGAGCG CAAGGACCGC
AAGGTCGCGG TGGTGCTGTT CAACTTCCCG CCGAACTCCG GCCATATCGG CACCGCGGCT
TTCCTCGGGG TGTTCGAGTC GGTGTACCGC ACGCTGCAAG CGATGCAGCG CGAGGGCTAT
CAGGTCGAGC TTCCCGCCAA TTCCGACGAG TTGCGCGAGC GCATCATCAC CGGCAACGCC
CAGCGCTTCG GCTCCGATGC CAATGTGCAT GCGCGGGTGA TGGCTGGCGA TCACGTCAAG
AACGAGCGTT GGCTGCGCGA GATCGAAGGC CAGTGGGGTC CGGCGCCAGG CAAGCATCAG
AGCGACGGCA GCTCGATCTT CGTGCTCGGC GAGCGCTTCG GCAACGTGTT CGTCGGTGTG
CAGCCGGCGT TCGGTTACGA AGGCGATCCG ATGCGCCTTT TGTTCGAAAA GGGCTTTGCG
CCGACGCACG CGTTCTCGGC GTTCTATCGC TGGCTGAAAG AAGATTTCGG CGCCCACGCG
GTGCTGCATT TCGGGACCCA TGGCGCCTTG GAGTTCATGC CCGGCAAGCA GACCGGCCTG
TCCGGCGCCT GCTGGCCCGA CCGCATGATC GGCGATCTGC CGAACGTCTA TCTCTATGCC
TCGAACAATC CGTCGGAAGG CTCGATCGCC AAGCGGCGCT CCGCCGCGAC GCTGATCAGC
TACCTGACCC CGCCGGTGGC GCATGCCGGC CTGTATCGCG GGCTGGTCGA GCTGAAATCC
TCGATCGAGC GCTGGCGCGG CCTGTCGCCG GACGACGAGG CGGAACGCGC CGATCTCGCG
GTGCTGATTC AGGCGCAGGC CAGCGCGCTC GACCTTGCGA CAGCCGAGCC GGCCTGGGGC
GATGCCGCCG TCGCCACCAT CGCGAAATTG TCCGAAGACG TGCTGGAAAT GGAATACGCG
CTGATTCCGC ACGGACTGCA TGTGGTCGGC GAAAATCCGA CGTTCGAGCA GCGGGTGGAA
ATGCTGCAAG CGGTGGCCGA TGCCTCGCAC GGCATTCGCC CCGAACAGTC GGTGATCGAA
GGGCTGGTCC GCGGCGAGCG GCCGGAGCAC GTGGTGGTCG GATCGGGGCC CGAGGCCGAG
GCCAATATCG CGATCTACAA GCAATTGGCG GCCACCGACC GGCTCTTGGC CGAGGATCAT
GAAATTCCCA GCCTGATCCA CGCCCTGGAC GGCGGGTTCA TCCGTCCGGC GCCCGGCGGC
GATCTGTTGC GCACGCCGGC GATTCTGCCG ACCGGCCGCA ATCTGCACGG CTTCGATCCG
TTCCGGATCC CCAGCGCGTT TGCGGTGCAG GACGGCGCGG CGCAGGCGCA GCGGCTGATC
GAAAAGCACA TGGAAGGCGG CAACGGCCTG CCGGAGTCGG TCGCCATCGT GTTGTGGGGC
ACCGACAACC TGAAGAACGA AGGCGCGCCG ATCGGCCAGG CTCTGGCCTT GCTCGGTGCC
CGGCCGAGGT TCGACAGCTA CGGCCGGCTG ACCGGCGCCG AACTGATCCC GCTCGGCGAA
CTCGGCCGGC CGCGCATCGA TGTCATCATC ACCATGTCGG GCATTTTCCG CGACCTGTTG
CCGCTGCAGA TCAAGCTTTT GGCAGAGGCT TGCTTCCTCG CGGCCTCGGC CGATGAGCCG
ACCGACTTCA ACTTCGTGCG CCGGCATTCG CTGGCGTATA TGGAACAACA CAAGTGCGAC
ATGGAGACCG CGTCGCTGCG GGTGTTCGGC AACGCCGACG GCGCCTACGG CTCCAACGTC
AACCATCTGG TCGAGAACAG CCGCTGGGAA GACGAGGACG AACTCGCCGA GACCTACACC
CGCCGCAAGA GCTTCGCTTA CGGCATGAAG GGCCAGCCGG TGCAGCAGGC CGATCTGTTG
AAGAGCGCGC TCGCCGACGT CGATCTGGCC TACCAGAATC TCGACTCCGT CGAACTCGGC
GTCACCACGG TCGATCACTA TTTCGACACG CTGGGCGGCA TCAGCCGCGC GGTGCGCCGC
GCCAAAGGCG GCACCGCGGC CCCCGTCTAT ATCGGCGACC AGACCCGCGG CGCCGGCACG
GTGCGAACCT TGTCGGAGCA GGTGGCGCTG GAGACGCGCA CCCGCATGCT CAATCCGAAA
TGGTACGAAG GCATGCTGAA GCACGGCTAC GAAGGTGTGC GGCAGATCGA AGAACACGTC
ACCAACACCA TGGGCTGGTC CGCGACCACC GGCGAGGTGG CGCCGTGGGT GTATCGCCAG
CTCACCGAAA CCTTCGTTCT CGACCCCGAA ATGCGCGCGC GTCTTGCGGC CCTCAACCCG
GTGGCGTCGG CGAAAGTCGC CAATCGCCTG ATCGAGGCAC ACGAACGCAA TTACTGGTCT
CCCGACCCGG AAATGCTCGA GGTCCTGCGC AAGGCAGGCG AAGAGCTTGA GGATCGCCTT
GAAGGCGTAG GAGTTGCCGC ATGA
|
|---|
| Protein sequence | MPKRTSPADA TPLRVVIVTM DSHLSGAAAR ARNLLRRDYP GIELTVHSAD EWGTDEGALG
RCYADIATGD IVIATMLFLD DHVRAVMPAL LARRLDCDAM ICCMSAAEVV KLTRVGKFDM
SAEALGAINW LKKLRGKKES GPAGKGEMKM LRQLPKLLRF IPGTAQDMRA YFLTLQYWLA
GSEQNIANMV RLLVDRYASG PRKGLRGIAK AEPPVEYADI GVYHPRMKGR IAESVDKLPT
IPNQQGTVGV LLLRSYLLAG NSGHYDGMIE AFEAKGLRVI AAFASGLDQR PAIEKFFMKD
GRSAVDAVVS LTGFSLVGGP AYNDSKAAED ILATLDVPYL SAHPVEFQTL EQWGASDRGL
MPVESTIMVA IPELDGCTGP MVYGGRSDAG EVPCAGCDRA CKFTRSENGG DMYTCAERAE
VLASRTAKLV ALRRSERKDR KVAVVLFNFP PNSGHIGTAA FLGVFESVYR TLQAMQREGY
QVELPANSDE LRERIITGNA QRFGSDANVH ARVMAGDHVK NERWLREIEG QWGPAPGKHQ
SDGSSIFVLG ERFGNVFVGV QPAFGYEGDP MRLLFEKGFA PTHAFSAFYR WLKEDFGAHA
VLHFGTHGAL EFMPGKQTGL SGACWPDRMI GDLPNVYLYA SNNPSEGSIA KRRSAATLIS
YLTPPVAHAG LYRGLVELKS SIERWRGLSP DDEAERADLA VLIQAQASAL DLATAEPAWG
DAAVATIAKL SEDVLEMEYA LIPHGLHVVG ENPTFEQRVE MLQAVADASH GIRPEQSVIE
GLVRGERPEH VVVGSGPEAE ANIAIYKQLA ATDRLLAEDH EIPSLIHALD GGFIRPAPGG
DLLRTPAILP TGRNLHGFDP FRIPSAFAVQ DGAAQAQRLI EKHMEGGNGL PESVAIVLWG
TDNLKNEGAP IGQALALLGA RPRFDSYGRL TGAELIPLGE LGRPRIDVII TMSGIFRDLL
PLQIKLLAEA CFLAASADEP TDFNFVRRHS LAYMEQHKCD METASLRVFG NADGAYGSNV
NHLVENSRWE DEDELAETYT RRKSFAYGMK GQPVQQADLL KSALADVDLA YQNLDSVELG
VTTVDHYFDT LGGISRAVRR AKGGTAAPVY IGDQTRGAGT VRTLSEQVAL ETRTRMLNPK
WYEGMLKHGY EGVRQIEEHV TNTMGWSATT GEVAPWVYRQ LTETFVLDPE MRARLAALNP
VASAKVANRL IEAHERNYWS PDPEMLEVLR KAGEELEDRL EGVGVAA
|
|---|
| |