Gene RPC_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1275 
Symbol 
ID3973033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1391033 
End bp1391737 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID637924385 
Productputative methyltransferase 
Protein accessionYP_531156 
Protein GI90422786 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.151489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.89967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAT TTCAGCCCGA AATTGGCGTC AATGCCGCCT GGCCGGTCGA CGCGACGCAG 
CGCATGAACC GGATGTATCG CTGGCAGCGC CACATCTATG ATGCGACCCG GCGTTACTAC
CTGCTCGGCC GCGACCACAT GATCGAACGC CTGAAGCCGG CGCCCCGCGC GCGCGTGCTG
GAGATCGGCT GCGGCACCGG CCGCAATCTG GTGGTCGCCT CGCGGCGCTA TCCGGAAGCC
AAATTCTTCG GCCTCGACGT GTCCACCGAA ATGCTGACTT CGGCGATCAC GGCGATTGCC
CGCGACGGCC GCAGCGACCG GGTTCGGGTG GCGCATGGCG ACGCCACCGC GTTCGATCCG
CGGCGGATGT TCGGCGTCCG CGCCTTCGAT CACGTGATGA TTTCCTACTG CCTGTCGATG
ATCGCCGACT GGCCGCGCGT GGTCGAGGCC GCGGCGCATC ATTTGGCGCC CGGCGGCAGC
GTCCACATCG TCGATTTCGG CGATCAGCAC GGCCTGCCGC GCTGGGCCCG CACCGCGCTG
CGGCGCTGGC TGGCGCTGTT CGACGTCACC CCGCGCGACG ATCTCGCCCG CACGCTGCAG
CGCTTCGCCG ACGCCCGCGG CGCCACGTTG CGGTTCGAGC GGCCGTATCG CGGCTACGCG
CAATATGCGG TGCTGAGCTT TCCGCCGGGC CCGCGCGCGC CTTGA
 
Protein sequence
MSAFQPEIGV NAAWPVDATQ RMNRMYRWQR HIYDATRRYY LLGRDHMIER LKPAPRARVL 
EIGCGTGRNL VVASRRYPEA KFFGLDVSTE MLTSAITAIA RDGRSDRVRV AHGDATAFDP
RRMFGVRAFD HVMISYCLSM IADWPRVVEA AAHHLAPGGS VHIVDFGDQH GLPRWARTAL
RRWLALFDVT PRDDLARTLQ RFADARGATL RFERPYRGYA QYAVLSFPPG PRAP