Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1275 |
Symbol | |
ID | 3973033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1391033 |
End bp | 1391737 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637924385 |
Product | putative methyltransferase |
Protein accession | YP_531156 |
Protein GI | 90422786 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.151489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.89967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAT TTCAGCCCGA AATTGGCGTC AATGCCGCCT GGCCGGTCGA CGCGACGCAG CGCATGAACC GGATGTATCG CTGGCAGCGC CACATCTATG ATGCGACCCG GCGTTACTAC CTGCTCGGCC GCGACCACAT GATCGAACGC CTGAAGCCGG CGCCCCGCGC GCGCGTGCTG GAGATCGGCT GCGGCACCGG CCGCAATCTG GTGGTCGCCT CGCGGCGCTA TCCGGAAGCC AAATTCTTCG GCCTCGACGT GTCCACCGAA ATGCTGACTT CGGCGATCAC GGCGATTGCC CGCGACGGCC GCAGCGACCG GGTTCGGGTG GCGCATGGCG ACGCCACCGC GTTCGATCCG CGGCGGATGT TCGGCGTCCG CGCCTTCGAT CACGTGATGA TTTCCTACTG CCTGTCGATG ATCGCCGACT GGCCGCGCGT GGTCGAGGCC GCGGCGCATC ATTTGGCGCC CGGCGGCAGC GTCCACATCG TCGATTTCGG CGATCAGCAC GGCCTGCCGC GCTGGGCCCG CACCGCGCTG CGGCGCTGGC TGGCGCTGTT CGACGTCACC CCGCGCGACG ATCTCGCCCG CACGCTGCAG CGCTTCGCCG ACGCCCGCGG CGCCACGTTG CGGTTCGAGC GGCCGTATCG CGGCTACGCG CAATATGCGG TGCTGAGCTT TCCGCCGGGC CCGCGCGCGC CTTGA
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Protein sequence | MSAFQPEIGV NAAWPVDATQ RMNRMYRWQR HIYDATRRYY LLGRDHMIER LKPAPRARVL EIGCGTGRNL VVASRRYPEA KFFGLDVSTE MLTSAITAIA RDGRSDRVRV AHGDATAFDP RRMFGVRAFD HVMISYCLSM IADWPRVVEA AAHHLAPGGS VHIVDFGDQH GLPRWARTAL RRWLALFDVT PRDDLARTLQ RFADARGATL RFERPYRGYA QYAVLSFPPG PRAP
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