Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1074 |
Symbol | |
ID | 3969586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1175842 |
End bp | 1176996 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637924185 |
Product | thiolase |
Protein accession | YP_530957 |
Protein GI | 90422587 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACGC GGACGCGTGG CCATGCGGCC GTCGTCGGCG TGGCCGAATC CGATCTCGGC ATCGTCGGAC CGCACATGAC GCCGGTCGAT CTGATGGCGC AGGCGACGAT GCGCGCGCTC GACGACTGCG GCCTCAAGCT CAGCGACGTC GACGCGGTGT TCGCCGCCAG CGCGCAGGTG CGGTTCGGGC CGATGATGCT CTGCGAGTAT CTCGGGCTCA ATCCGCGCAC CATCGACGGC ACCCAGATCG GCGGCTCCTC GTTCATGTCG CATCTGGCGC ATGCGGTGGC GGTGATCGAG CTCGGGCTGT GCGAAGTGGC GCTGATCGCC TATGGCAGCA CGCAGCGCTC GGTGTCGCGC GCCGCCGCGT CGCCGACCGA TATCAATCCT TACGAGGCGC CGTTTCGGCC GGTGATGCCG GCGAGCGCCT ACGCGCTGGC CGCCGCCCGA CACATGTATC AGTTCGGCAC CACGCGCGAG CAGCTCGCCG ACGTCGCGGT CGCGGCGCGG CAATGGGCGC TGCTCAATCC GAAGGCCTGG GAGAAAGAAC CGCTCAGCCG CGAGCAGGTG CTGGGCGCGC GGATGCTGTC GGACCCGCTC ACCGTGCGCG ACTGTTGCCT GGTGCTCGAC GGCGGCGGCG CCATGATCGT GACTTCGGCG GCGACCGCGC GCGATTGCCG CAAACTGCCG ATCCATGTGC TCGGCACCGG CGAAGCCATC GGCCACGGCT CGATCTCCGG CATGGCCGAC CTCACCACCA CGGCCGCCGC GGTCTCCGGG CCGCGCGCCT TTGCGGCGGC GGGCTTAGCG CCGGCCGACA TCGACGTCGC GCTGCTATAC GACGCCTTCA CCATCACGCC GATCCTGTTT CTCGAGGATC TCGGCTTCTG CGCCAAGGGC GAGGGCGGTT CTTTCGTGCA GGACGGTGGC ATCGCGCCGG GCGGTCGCCT CGCCGTCAAC ACCAATGGCG GCGGGCTGTC CTACTGCCAT CCCGGCATGT ACGGCCTGTT GGCGATGATC GAATGCGTCC GGCAGCTGCG CGGCGAATGC GGCGCCAGGC AGCTCGCCAA GCACAACGTC GCACTGGCGC ACGGCAATGG CGGGGTGCTG TCCAGCCAAT GCACCGCGAT CTTCGGCACA CCGGCGGCGC TGTAG
|
Protein sequence | MTTRTRGHAA VVGVAESDLG IVGPHMTPVD LMAQATMRAL DDCGLKLSDV DAVFAASAQV RFGPMMLCEY LGLNPRTIDG TQIGGSSFMS HLAHAVAVIE LGLCEVALIA YGSTQRSVSR AAASPTDINP YEAPFRPVMP ASAYALAAAR HMYQFGTTRE QLADVAVAAR QWALLNPKAW EKEPLSREQV LGARMLSDPL TVRDCCLVLD GGGAMIVTSA ATARDCRKLP IHVLGTGEAI GHGSISGMAD LTTTAAAVSG PRAFAAAGLA PADIDVALLY DAFTITPILF LEDLGFCAKG EGGSFVQDGG IAPGGRLAVN TNGGGLSYCH PGMYGLLAMI ECVRQLRGEC GARQLAKHNV ALAHGNGGVL SSQCTAIFGT PAAL
|
| |