Gene RPC_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1073 
Symbol 
ID3969585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1175459 
End bp1175845 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content67% 
IMG OID637924184 
Producthypothetical protein 
Protein accessionYP_530956 
Protein GI90422586 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGC CTGCGGCGGC TCCGCTGGAG ACTTATCTCG CGCATCTGGC ACGCGGCGAA 
CTGGCGTTTC AGCGCGCGCC CGACGGCACG GCGGTGTTCT TTCCGCGGCT GGTGGCGCCG
CGCTCCGGCG CGACCGATCT GCAATGGCAA ATCTCCGCCG GGCTCGGCAC GGTCTATTCG
GCCACCACGC TGCATCCCAA GGGCGAGCCC GCATATAATG TGTCGCTGAT CGACGTCGAC
GAGGGGTTTC GCCTGATGAG CCGTGTCGAA GGCGTCGATC CCGCCGCGGT GAAGATCGGC
ATGCGGGTGC GGGTGCGGAT CACCCATGAT GCCGCCGGCA CGCCGCTGCC GGTGTTCGAT
GCACTCAATG CGGAGCAGAA CTCATGA
 
Protein sequence
MSAPAAAPLE TYLAHLARGE LAFQRAPDGT AVFFPRLVAP RSGATDLQWQ ISAGLGTVYS 
ATTLHPKGEP AYNVSLIDVD EGFRLMSRVE GVDPAAVKIG MRVRVRITHD AAGTPLPVFD
ALNAEQNS