| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1055 |
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| Symbol | |
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| ID | 3969626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1160448 |
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| End bp | 1161662 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637924166 |
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| Product | Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| Protein accession | YP_530938 |
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| Protein GI | 90422568 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit
[TIGR03136] Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCAAC AACTCTTTAC GATCTTTCCC GGCATCGCGA CGATGTTCGT GCAAGAGCCG
TCCATCGCCT TCGCCCGCGT CTTTCTGATC GTCGCCGGGT TCTTTCTTGC CTATCTCGGC
TTCAAGCGCA CGCTCGAGCC GCTGATCATG GTGCCGATGG GCGTCGCCAT GATGTGCGTC
AACGCCGGCG TGATGTTCCT CGAGGGCAAT CACATCGGGA CGCTGATGCT CGATCCGATG
ATCTCGGATC CGGTCAAGCT CGTCAATGAA ATGCAGATCT ACTTCCTGCA ACCGGTTTAC
AACTTCGCCT TCTCGAACTC GCTGGTCGCC TGCATGCTGT TCTTCGGCAT CGGGTCGATG
TCGGACATCT CCTTCATTCT GGCCCGTCCT TGGGCGGTGA TGACCTGCGC CATCTTCGCC
GAAATGGGCA CCTTCGTGAC GCTGGTGATC GGCTATTACT GCGGCCTGAC GCCGGGTGAA
GCGGCGGCGG TGGGTACGAT CGGCGGTGCC GATGGCCCGA TGGTGCTGTT CGCCTCGCTG
ATGATGGCCA AGAACCTGTT CGTGCCGATC TCGATCATCG CCTACCTCTA TCTGTCGCTG
ACCTACGCCG GCTATCCCTA TCTGATGAAG TTCCTGGTGC CGAAGAAGTA TCGCGGCATG
GACGTCGAGA TGGAATTCCC GGATGTCTCG CAGAAGGCGA AGTTCATCTT CACCATCGTC
TCCGCCGCGT TGCTCTGCCT GCTGCTGCCG GTCGCATCGC CGCTGATCCT GTCGTTCTTC
CTCGGCATCG CCATCAAGGA AGCCGAGATC GAGGTCTACC AGGAGCTGCT CGAGAAGACG
ATCACCTACA TGTCGACGTT GATGCTCGGC CTGGTGCTCG GCGTGCTCTG CGAAGCCTCG
ACCCTGCTCG ACAGCCGCGT GCTGATCTTG CTGGTGCTCG GCATCACCGC GCTGCTGGTC
TCGGGCATCG GCGGTTTGGC CGGCGGCTGG CTGGTCTACT TGATCAGCAA GAAGGCCTTC
AACCCGCTGG TCGGCATCGC CGGGATCTCC TGCGTGCCGA CCACCGCGAA GCTCGCCCAG
AAGATCGCTG CCGAGGAGAA TCCCTACGCG ATGATCTTCC CGGTGGCGAT GGGTGCCAAC
ATCTGCGGCG TCATCGTCTC GGCGATCGCG GTCGGCATCT TCGCCTCGAC GATCGGTCTC
GTGGCTCCTC ACTAA
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| Protein sequence | MLQQLFTIFP GIATMFVQEP SIAFARVFLI VAGFFLAYLG FKRTLEPLIM VPMGVAMMCV
NAGVMFLEGN HIGTLMLDPM ISDPVKLVNE MQIYFLQPVY NFAFSNSLVA CMLFFGIGSM
SDISFILARP WAVMTCAIFA EMGTFVTLVI GYYCGLTPGE AAAVGTIGGA DGPMVLFASL
MMAKNLFVPI SIIAYLYLSL TYAGYPYLMK FLVPKKYRGM DVEMEFPDVS QKAKFIFTIV
SAALLCLLLP VASPLILSFF LGIAIKEAEI EVYQELLEKT ITYMSTLMLG LVLGVLCEAS
TLLDSRVLIL LVLGITALLV SGIGGLAGGW LVYLISKKAF NPLVGIAGIS CVPTTAKLAQ
KIAAEENPYA MIFPVAMGAN ICGVIVSAIA VGIFASTIGL VAPH
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