| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0893 |
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| Symbol | hisS |
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| ID | 3969773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 988691 |
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| End bp | 990250 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637924009 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_530782 |
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| Protein GI | 90422412 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.200439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA AACCCAAAAA ATCCCAGAAA CTCCGCGCCC GGCTGCCGCG CGGCCTCGCC
GATCGCGGCC CCGCCGAACT CGCCGCGACG AGGGCGATGG TCGAGACCAT CCGCGCGGTC
TATGAGCGCT ACGGCTTCGA GCCGGTGGAG ACCCCGGCGT TCGAATTCAC CGACGCGCTC
GGCAAGTTCC TGCCCGACCA GGACCGCCCC AACGAGGGCG TGTTCTCGTT CCAGGACGAC
GACGAGCAAT GGATTTCCTT GCGCTATGAC CTCACCGCGC CGCTGGCGCG CTATGTGGCG
GAGAATTTCG ACTCTTTGCC GAAGCCGTAT CGCAGCTACC GCAACGGCTA CGTCTACCGC
AACGAGAAGC CCGGCCCCGG CCGCTTCCGG CAATTCATGC AGTTCGACGC CGACACGGTC
GGCAGCGCTT CGCCCGCCGC CGACGCCGAG ATGTGCATGA TGGCTGCGGA TGCGATGGAG
GCCTTGGGCA TCCCGCGCGG GTCGTATGTG GTGAAGGTGA ACAACCGCAA GGTGCTCGAC
GGGGTGATGG AGTCGATCGG TCTCGGCGGC GAGGAGAACG CGGGTCGCAG GCTCACGGTG
CTCAGGGCGA TCGATAAGCT GGATCGGCTT GGTATCGAAG GGGTAAAGCT CCTGTTGGGG
GAGGGCCGTT GGGACGGGGG CGAGCAAGGT AAAGGCGATT TCACAATTGG CGCTCAGCTC
TCCCCGGAAA CCTCCACTCC AATCTTGAAT TATCTAGATC TCGGTATTCG TGTTGCCCGT
GATCGAGTCG AATCACCTAA TCGCGAACTC GGCATAGTAG GGTATTTGGA GCAGATAGTA
AGCGGCTCCG AAACTGGAGC TCAGGGAACG ACGGAATTAG CTCAAATCGT CCGTCTAGTT
GAAGCAGCCG GATACGATGA TGGTCGCATC CGCATCGACC CTTCGGTCGT CCGCGGCCTC
GAATACTACA CCGGCCCAGT CTACGAAGTG GAATTGCTGC TCGACACCAA GGACGAAAAA
GGCCGCCCGG TCCGCTTTGG CTCAGTCGGC GGCGGCGGGC GCTATGATGG ATTGGTGTCG
CGATTCCGCG GCGAGCCGGT GCCGGCCACC GGCTTCTCGA TCGGCGTGTC GCGGCTGCAG
GCGGCTCTCA CGCTGCTCGG CAAGCTCGAC ACCAGGCCGC AGGCCGGCCC CGTGGTGGTC
ACGGTGTTCG ACCGCGACCG CGTCGCGGAC TATCAGAAGA TGGTGGCGCG CCTGCGCGCC
GAAAACATTC GCGCCGAACT CTATCTCGGC AATCCGAAGA ACATGGGCAA CCAGCTGAAA
TACGCCGACA AGCGCAATTC GCCTTGCGTG ATCATCCAGG GCTCGGACGA GAAGAACGAT
CCGGACGGCG CGCAGATCAT CGTCAAGGAC CTTGTGCTCG GCGCCGAATT GGCGTCGCTG
GAAAAGGACC GCGAGGAATA TCTGCAGAAA CAGGCCGAGG CGCAGCGCAA GGTGCCGGAA
GCCGACCTCG TCGACGAGGT CCGCCGCATC CTCGCCAAGC ATAGCGTGCG CTGGAGCTGA
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| Protein sequence | MAEKPKKSQK LRARLPRGLA DRGPAELAAT RAMVETIRAV YERYGFEPVE TPAFEFTDAL
GKFLPDQDRP NEGVFSFQDD DEQWISLRYD LTAPLARYVA ENFDSLPKPY RSYRNGYVYR
NEKPGPGRFR QFMQFDADTV GSASPAADAE MCMMAADAME ALGIPRGSYV VKVNNRKVLD
GVMESIGLGG EENAGRRLTV LRAIDKLDRL GIEGVKLLLG EGRWDGGEQG KGDFTIGAQL
SPETSTPILN YLDLGIRVAR DRVESPNREL GIVGYLEQIV SGSETGAQGT TELAQIVRLV
EAAGYDDGRI RIDPSVVRGL EYYTGPVYEV ELLLDTKDEK GRPVRFGSVG GGGRYDGLVS
RFRGEPVPAT GFSIGVSRLQ AALTLLGKLD TRPQAGPVVV TVFDRDRVAD YQKMVARLRA
ENIRAELYLG NPKNMGNQLK YADKRNSPCV IIQGSDEKND PDGAQIIVKD LVLGAELASL
EKDREEYLQK QAEAQRKVPE ADLVDEVRRI LAKHSVRWS
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