Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0838 |
Symbol | |
ID | 3969835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 925122 |
End bp | 926159 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923954 |
Product | inner-membrane translocator |
Protein accession | YP_530727 |
Protein GI | 90422357 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.825897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.140783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATA CCCACATCGT TGATATCAAG GCGCCCGCGC GGCCGGTGCG GGTGATCGAC CGGCTCGGCC TTGCGATGCG CGCGAGCCAC GTGCTGGTCG CGCTGTTCGT GGTTGCCGCG TTGATCTTTG CCGCGGTCGG GGTGCTGCAG GACGACCGGT TCTTTCTGCG GCTCGGCACC GAGGCGCTGA TCTTCGCAGG GCTGGCGCTG TCGGTGGATA TCCTGCTCGG CTATTCCGGG CTGTTGTCGC TCGGCCAGGC GCTGTATTTC GGGCTCGGCG CCTACGTCTC GGCGGTGGTG CTGAAAGAAG TGCCGTCGTT TTGGGCGGCG ATGGCCGCGG CCTTGCTGGT CTCGCTGGTG ATCGGCTTTC TCGCAGGATT GATCGCCAAC CGGGTCCGCG GGGTGTATTT CGCCCTCGTC ACCTTCGGGC TGGCGCAGGT CGCAGCCCGC GCCGTCTACA ACACCCGCTC GCTCGGCGCC TCCGACGGGC TGATCGGCGT GCCGGTGGTG CCGATCGACC TCGGCGTATT CACCGTGATG TCGAATTCGC CGGCCGGGTT CTTCCTGTTC ACGCTCGGCT TCATCGTCCT GCTCTACGCG GTCTGCGCCT ATCTGCTGGA TACGCCGTTC GGCCGCGTGC TGCTGGCGTT GCGCGCCAAC GAGCGCCGGG TGCCGTCGCT CGGCTATTCG ACCCGCAATC TGCGGCTGTC GGCTTATGTG CTGGCTGCGG TGATTGCCTC GTTGTCCGGC GCGCTGTATC CGATGCTGCG CGGCTTCGTG TCGCCGGAAC TGTTGTTCTT CACCACCTCG GGCAACGCGG TGATCACCGT GGTGATCGGC GGCGTCGGCA CGCTAGCCGG CGCGCTGTAT GGCGGCGTGA TCCTCACCGT GCTGAAATCG GTGATCGGCT CGCTCACCGA ACACCATCTG ATCGTGATCG GGCTGTTGTT CATGGCCACC GTGATCTTCC TGCCGAAAGG CCTGATGGGC GTGGTGCGGC CGCTGGTCGA GCGTGTGCTG CGCGGAGGCA AGCGATGA
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Protein sequence | MVDTHIVDIK APARPVRVID RLGLAMRASH VLVALFVVAA LIFAAVGVLQ DDRFFLRLGT EALIFAGLAL SVDILLGYSG LLSLGQALYF GLGAYVSAVV LKEVPSFWAA MAAALLVSLV IGFLAGLIAN RVRGVYFALV TFGLAQVAAR AVYNTRSLGA SDGLIGVPVV PIDLGVFTVM SNSPAGFFLF TLGFIVLLYA VCAYLLDTPF GRVLLALRAN ERRVPSLGYS TRNLRLSAYV LAAVIASLSG ALYPMLRGFV SPELLFFTTS GNAVITVVIG GVGTLAGALY GGVILTVLKS VIGSLTEHHL IVIGLLFMAT VIFLPKGLMG VVRPLVERVL RGGKR
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