Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0749 |
Symbol | |
ID | 3969974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 826038 |
End bp | 826964 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637923864 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_530639 |
Protein GI | 90422269 |
COG category | [R] General function prediction only |
COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.385476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCAC GCCTGTTCAT GTCATCGGGC GATATGCTCG CCGATCGGCG GTTCGATTTC GCGCGCGATC TGCAAGTCCA AGGCGATCTG GTGGCGGCCG AGGATCTATT GGTCCAGGTG GCTAGCCTGG CGCCGGGTTT CGCCACCGCG TGGTTCGCGT TGGGCGAAGT CCGCGAACAA CTCGGCGACC GCGACGGCGC GGTGATCGCG TTCCGCAATG CGCAGATGAC CGATCCCGAC GACCGCAACG GCGCGGCGCT GCGGCTGATG CGGCTGGATG CCGCCGACCT CGCGGCGATG CCGCCGGGCT ATGTCCGCGC GCTGTTCGAT CAATACGCCC CGAACTTCGA GGCCGCGGTG CTGGACGATC TCGGCTATCG CGGACCGGCG CTGCTGCGCC AGGCGATCCT TGCGGTGCGC GCCGCGGCGG ATCGACCGGC GTGGTTCGAT CACGGCCTCG ACCTCGGCTG CGGCACCGGG CTCGCTGCCT TGGCTTTGGC GCCTTATGTC GGCGAGATGA TCGGTTTCGA CCTATCGCCG CGCATGGTGG AGCGCGCCCG CGCCACCAAG CGCTACGCCC AGGTGGAGGA AGCGGAGGTG GTCGATGCGC TGCGCGACCG GCCGACCGCC AGCGCCGATT TGATCCTTGC CGCCGATGTC GTCGGCTATC TTTGCGACGT CAACCCGCTG CTGATCGAAG CCGCGCGGGT GCTGGCGCCG GATGGATTGC TGGCGCTGAC GGCGGAAACC CATGACAGCG ACGGCGTCGT GCTCGGCGCC GGGCTGCGCT ACGCCCATGG CGCGCGCTAT CTGCAGAGCG CCATGGCGGC CGCGGGCCTG GTCGTAAAGC ACCTGGAGCA GGCGTCGGCG CGCAGCGAAG CCGGCGTGCC GGTGCCGGGG CTGGTGATCG TCGCGGCGCA GCCATAG
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Protein sequence | MPARLFMSSG DMLADRRFDF ARDLQVQGDL VAAEDLLVQV ASLAPGFATA WFALGEVREQ LGDRDGAVIA FRNAQMTDPD DRNGAALRLM RLDAADLAAM PPGYVRALFD QYAPNFEAAV LDDLGYRGPA LLRQAILAVR AAADRPAWFD HGLDLGCGTG LAALALAPYV GEMIGFDLSP RMVERARATK RYAQVEEAEV VDALRDRPTA SADLILAADV VGYLCDVNPL LIEAARVLAP DGLLALTAET HDSDGVVLGA GLRYAHGARY LQSAMAAAGL VVKHLEQASA RSEAGVPVPG LVIVAAQP
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