| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0674 |
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| Symbol | |
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| ID | 3970613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 735304 |
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| End bp | 737598 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637923790 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_530565 |
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| Protein GI | 90422195 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0975294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCAT ATGATCAGCC GATAGCTGCG CAGCCTTTGG CAAGACCACG GCCGCCGACG
GCTGCGGGCT TTACCGTTGC CGATCTGGTC GAGCTGCTGT GGCGCCGCAA GGCGGCGATC
GCGATGGCGG CGCTGATCGG CGGCTGCGTG GCGGTGATGG TCGGCAAGAG TCTGACGCCG
CGCTATTTGG CGACGGCGCA GCTCTACGTC GATCCCCGCG AGTTGCAGCT GGTCGACCGC
GAATTGACGC CGCGCGCGCA GGATGTCTCC GGGTTGGCGA TGATGGTCGA AAGCCAGGCC
CGACTGATCA CCTCGAACAA CGTGCTGCTG CCGGTGATCG ACCAGCTTCG GCTCGAACAG
GATCCGGAGT TCGGCGGGGC GTCCGACGGA CTGATGAGCG CGTTGCTGGG CCTCGCCGGC
TTCGGCAGCA AACCGTCGGT CGATGCGAAC GCCGTCAAGA TGGCGGTGTT GGAGATTCTC
AACCGACACA TCGCCGTGAA GCGCGCCGAC CGCAGCTTCA TCGTCGACAT CGACGTCTGG
TCGCGCGACC CGGCCAAGGC AGCCCTGCTC GCCAACACGA TTTCCGCCGC CTATCTCGCC
GAGTCCCGGC AGTCGCAAGC GGCGGCCGCG CGTCGCGCCA CCACCGACCT TTCCGGCCGG
CTGAAGGAAC TGCAGGCCAG GCTGCGCAGC GCGGAAAACG CATTGGCGGT CTACAAGGCG
CAGAACAATT TCGTCGGCAC CCAGGACACC CTGGTCAGCG ACCAGCAGCT GTCGGCGAGC
ACCCAGCGGC TCGCGGCGGC GCGCGCCCAG ACGCTCGACG CCCAAGCCCG TTACGACCAG
ATGGAGAGCA GCCGGCGCGC CGCCGCGGAT GCCGGCGCCA TTCCGGAGGC GCTGCAATCC
CCCACCATCG CCAGCCTGCG GTCGCAATAT GCCGAGACCC GGCGGCGCTA CGCCGAATTG
GTCGGCGAAT TGGGGCCCCG GCATCCGGCG CTGAAGAACA TGGAAAAGCA GGTCGAGGAC
CTGCGGCGAA CCATCACCGA AGAAGTCAGC CGCTTCGCGC AGTCGGCCAA GAACGATCTC
ACCCGTGCCC GCGACTATGA GGCGTCGTTG ACCAAGGCGC TCGAAGAGCA GAAGCGCCAG
AGCGTCGATC TCAGCCAGGC CTCGGTCCGG CTGCGCGAAC TGGAACGCGA CGTCGAGGCC
AGCGGCAGCG TCTATCAGTC GTTCCTGAAA CGCTCGCGGG AAACCGAGGA GCAGGAAAGC
CTGAATACCT CGAGTGCGCG GATCATCGGC GAGGCGAATC CGCCGCAGCG CCGGATATTC
CCGCCGGCCA TGAGCATGCT GGCGATGCTC GGCTTCGCGC TCGGCGGGTT CGCGGCTGCG
GCCGGGACCC TTGTGCTCGA ACGGCTGCGA CAGCCGCAAG CGGTGCCGCC GAGCTCGCCC
GGGGTGCCGG AGGCGAGCCC GCCATCGTCA CCGTCGAAGC CTGCCGCGAC CGCTCAGCCG
GCGGTCAAGC TGGCGCCGGT GTTGCGGGAA AAGCCGCTGA TCGCCCGCCT GCAACCGAGC
GATGTGTTGC TGACGCTGAA TGGAATTTTG TCCGGCGCCG ACACCGCCGA CGTCACCAGC
ATCGGCTGGC CGACGCTCCG CGCCGGGCTT GCGATGACGC CGTTCCTGGA CGCGATGCGT
CAGCTCCGCG CCGCCGCGCT GCGACGTTCC GGAGGAGTGG TGCCGGTTAT TGCGGTGATC
GGACCGCCGA GCGGAGAGGA TCGGGCGATT ACTACGCTCA ACATCGCACT GGCCGCCGCG
CGCGACGGCG CCAAGGTGCT GCTGGTCGAT GCCGATCCAT TGCAGCACGT CTTGTCCGAC
AAATTCGCCG CGATGCGTAA GGACGACAGC GGCAGCGGTC GCTGGCCTCG CTTCGCCGAA
CGGACGACGC CGCCGATCGT GACCGTCAAC GGCATCAGCA TCGTGACGCT GCCGAAATCA
GCGGACGCCA AGCCGAACGC CACGGCGAGC GCCAAGAGAA TTCGCAACGC GATCACGCAA
GCCCGCGCCG GGCAAGGCTA CGATCTCGTC ATCCTCGACG GACCGACGTT GCCCGGGAGC
GAGCTGCATC GCGAGCTGTT GGCGCCTGAC GACGACATCG TCGTGGTGCT GCCGGCCGCC
TCGGATATCA ATCGCTGCAT GGATGACGTG ATCGCGGCAT TGGACGGAGC GGAACACGCC
ATCATCGGCG TCGTGCTCAA TGAACTTCCG TCGACCGACG ACAAGCACCA GCAGCAGATC
CGGCAATCCG CCTGA
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| Protein sequence | MLAYDQPIAA QPLARPRPPT AAGFTVADLV ELLWRRKAAI AMAALIGGCV AVMVGKSLTP
RYLATAQLYV DPRELQLVDR ELTPRAQDVS GLAMMVESQA RLITSNNVLL PVIDQLRLEQ
DPEFGGASDG LMSALLGLAG FGSKPSVDAN AVKMAVLEIL NRHIAVKRAD RSFIVDIDVW
SRDPAKAALL ANTISAAYLA ESRQSQAAAA RRATTDLSGR LKELQARLRS AENALAVYKA
QNNFVGTQDT LVSDQQLSAS TQRLAAARAQ TLDAQARYDQ MESSRRAAAD AGAIPEALQS
PTIASLRSQY AETRRRYAEL VGELGPRHPA LKNMEKQVED LRRTITEEVS RFAQSAKNDL
TRARDYEASL TKALEEQKRQ SVDLSQASVR LRELERDVEA SGSVYQSFLK RSRETEEQES
LNTSSARIIG EANPPQRRIF PPAMSMLAML GFALGGFAAA AGTLVLERLR QPQAVPPSSP
GVPEASPPSS PSKPAATAQP AVKLAPVLRE KPLIARLQPS DVLLTLNGIL SGADTADVTS
IGWPTLRAGL AMTPFLDAMR QLRAAALRRS GGVVPVIAVI GPPSGEDRAI TTLNIALAAA
RDGAKVLLVD ADPLQHVLSD KFAAMRKDDS GSGRWPRFAE RTTPPIVTVN GISIVTLPKS
ADAKPNATAS AKRIRNAITQ ARAGQGYDLV ILDGPTLPGS ELHRELLAPD DDIVVVLPAA
SDINRCMDDV IAALDGAEHA IIGVVLNELP STDDKHQQQI RQSA
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