Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0667 |
Symbol | |
ID | 3970606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 727109 |
End bp | 728539 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923783 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_530558 |
Protein GI | 90422188 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.529656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAATC GGTATTTTTC CATCTATCTG GGCGCGCATC TGGTGCCGGC GGTGATCGGC TTCATCGCCA TCACCGCCTA TACCCGGCTG CTCAACCCGG CGGAATACGG CGTCTACGTG GTCGGCATGA GCATCGCCGG AATCGTCGGC GCGGTGTTCT TCGTCTGGAT CCGGCTGTCG GTGTCGCGCT ATCAGGCGAG TTCGGCCGAC GTCGATTTCC GCGGCACCGC GATGGTCGCC TACGGCCTGA CGCTGGCGGC GATGGGCTGC GTCGCGCCTG CGGCGATTCT GCTGCTCAGC CCGGACGTCA ACGTCTACCT GTTGGTCGGC GGCGTGTTCA CCGCCTTGGC GGTCGGCGCC TTCGACATCG CCCAGGAGTT CGCCCGCGCC ACGTTGCGGC CCTATCGCTA TGCGGCGATC GGCATCACCC GAGCCGTGCT CGGTCTGGCG CTGGGTTGGC TGGCGATCGA ACTCGGCTGG GGCGGCCTCG GGCTGCTCTG CGCGGTCGGC TTGAGCTTCC TGATCGGCGC CGTGTTGAAC GCGATCGACG GCAAGGCACC GCGGATCAGC CGCTATCGGC GTGACCAGTT GATGCAGTTC GCGCGCTACG GGTTGCCGTT GTCGCTCGGC GGCCTGTCGA TGGCGCTGTA CAGCACCAGC GACCGGCTGG TCGTCGCCTA TCTGCTGGGG CCGGATGCCG CGGGAAAATT CGGCGTCGCG GCCGATCTTC CGCGCCAGTT CATGGTGATG CTGGCCTCCA GCGTCGCCGC GGCGACCTTT CCGATCGTGT TCCGGACGTT CAGCGGCGAG GGCCTCGCCG CGACCCGCGA GCGGTTGAAT GAGAACATCG AATTGCTGCT CGCCGTGATC CTGCCGGTCG CGGTGTGGCT GGCGTTGGCC GCCGACCAGG TGGCAGGGAC GCTGGTCGGG CAGGACTTCC GCGCCAGCGT GACGCTGCTG CTGCCGATCG TCGCGCTGGC GCGGGTGCTC GGTGTGATCA ATCAGTTCTA TCTGCAGATC AGCTTCCAGC TGGCCGAACG GCCGATGCTG CCGGTGATCC AGTCGATCAT CACGCTGGTG CTGAGCATCA CCTTGATGTT CCCGCTGGTC GCGGCGTTCG ATCTGCTGGG GGCGGCCTAT GCGACGCTGG TCACCGAGGC GGCCGGCGTG GTGATCACCA TCGTTTTGAC GCGCAAGGCG TTCGTGCTGC CGTTCGAGCC GCGCCGGCTG GCCGGAGTGC TGCTGGCCTC GGCGGTGATG GGCGTCGCGA TCTACGCCAC CCGGAGCGCG GTGGGCGGCA CCGGACTGAT TTCGCTGATG ACGGTGAGCG CCGCGGGCGG GGTGGCCTAT GCCGCCGCCG CCTGGCTGCT CAACGTGGTG CGAATCAGGA CCTCGATGTC GTCGTTTCTC CGGCTGCGGA TGGCGCACTG A
|
Protein sequence | MLNRYFSIYL GAHLVPAVIG FIAITAYTRL LNPAEYGVYV VGMSIAGIVG AVFFVWIRLS VSRYQASSAD VDFRGTAMVA YGLTLAAMGC VAPAAILLLS PDVNVYLLVG GVFTALAVGA FDIAQEFARA TLRPYRYAAI GITRAVLGLA LGWLAIELGW GGLGLLCAVG LSFLIGAVLN AIDGKAPRIS RYRRDQLMQF ARYGLPLSLG GLSMALYSTS DRLVVAYLLG PDAAGKFGVA ADLPRQFMVM LASSVAAATF PIVFRTFSGE GLAATRERLN ENIELLLAVI LPVAVWLALA ADQVAGTLVG QDFRASVTLL LPIVALARVL GVINQFYLQI SFQLAERPML PVIQSIITLV LSITLMFPLV AAFDLLGAAY ATLVTEAAGV VITIVLTRKA FVLPFEPRRL AGVLLASAVM GVAIYATRSA VGGTGLISLM TVSAAGGVAY AAAAWLLNVV RIRTSMSSFL RLRMAH
|
| |