Gene RPC_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0558 
Symbol 
ID3970762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp607157 
End bp608173 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content71% 
IMG OID637923675 
Productalpha/beta hydrolase fold 
Protein accessionYP_530452 
Protein GI90422082 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR03056] putative magnesium chelatase accessory protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTC CGCAACGCCC CCACGATTCG AGTTCTCATC TGCAGGAGAA TGCCGTCATG 
CGCACCATCC CCACCGAACA ACCCGCGGTC GCGCCGCGTC GCGCCGAGCT TCATCCGAAG
CCGTGCTGGG AGCGTGACGG CCACGATTGG CCGAACCGCG ACTCGAGCCG CTTCGTGCAG
GCCGCCGGCT TTCGCTGGCA CGTGCAACAG ATGGGCCGCG GCCCGGCGCT GTTGCTGGTG
CACGGCACCG GCGCCGCCAC CCATTCGTGG CGCAAGCTGG CGCCGCTGCT GGCGCAGCAT
TTCACCGTGG TGGCGCCCGA CCTGCCGGGG CACGGCTTCA CCGAGACGCC GGCGTGGAAG
CGACTCAGCC TCGACGGCAT GGCGGAGGAT CTGGCGGCGC TGCTGCGGGT GCTCGATCAC
GCCCCGGTGC TGGTCGCCGG GCATTCCGCC GGCGCCGCGG TGCTGGCGCG GATGTGCCTC
AATGGATCGA TCACGCCCGA CGGGCTGTTC GGCCTCAACG GCGCGATGCT GCCGATCGGC
GGCATGGCCG GACGGCTGAT GACGCCGTTC GCGCAAGTGC TGGCGGGGAG CCGCCTGGTG
CCGCGGCTGT TCGCGCGCTT CGCCTCCAGC GACAAATTCA TCGAGCGGAT GATCGCCGAC
ACCGGATCGG TGCTCGATCC CGCCGGGCTC GAATTCTATC GCCGGCTGAC CTGCAGCCCC
GGCCATGTCG CCGCGGCGCT GCGGATGATG GGAAACTGGA AGCTGCGGCC GCTGGCAGCG
GAGCTGCCGC GGCTCTTGAC CAAGCTGGTG CTGGTGACCG GCGGCAACGA CAAGACCATC
GCGCCCAAGG ACGCCGCGCG GGTCCACGCC ATGGTGCCGG GCTCCAGCGT CGTCGCCATG
CCGGGCCTCG GCCATCTCGC CCATGAGGAG CGGCCGCACG AGGTCAGCGC CTTGATGATC
GAGTTCGCCC GTCGCGCCGG GCTGTTGCCG CCGCTGCTCG CCGGCGCTGC GGAGTAG
 
Protein sequence
MSGPQRPHDS SSHLQENAVM RTIPTEQPAV APRRAELHPK PCWERDGHDW PNRDSSRFVQ 
AAGFRWHVQQ MGRGPALLLV HGTGAATHSW RKLAPLLAQH FTVVAPDLPG HGFTETPAWK
RLSLDGMAED LAALLRVLDH APVLVAGHSA GAAVLARMCL NGSITPDGLF GLNGAMLPIG
GMAGRLMTPF AQVLAGSRLV PRLFARFASS DKFIERMIAD TGSVLDPAGL EFYRRLTCSP
GHVAAALRMM GNWKLRPLAA ELPRLLTKLV LVTGGNDKTI APKDAARVHA MVPGSSVVAM
PGLGHLAHEE RPHEVSALMI EFARRAGLLP PLLAGAAE