| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0542 |
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| Symbol | |
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| ID | 3970783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 585318 |
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| End bp | 588470 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923658 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_530436 |
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| Protein GI | 90422066 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.757487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.763027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGT CCACCCGCAT GGCATTGGCG ATGGTTGCGC TGGTGTCGTT CACGACCATC
GCTCTGGGCT TGCTGACTTA TCACAGCGTC ATGACGCTGA TCCTGCCGCG CGCGCTCGAC
CGGCTGCAAA CCCACGCCCG CGTCACCGCC ATGTTGCTGG ACGCCTCGTT GCGCAGCGCC
CGCACCGACG CTGCTATCGC GCAAACCTCC GGGGCGGCGA TGATGATGCA CCTGCGCAAG
CAGTTCGGTG CCGCCCCGGA CAAAATCGAA AGCGAATGGA AGGAAGCCAC CGCGGAGCGC
TTCGCGGCGG AGATGTCCGG CAAGCCCGCC TACGCGCAGA TGCGCGTGAT CGGGGTCGCC
GACGGCGGCA TGGAAATCGT CCGTGTCGAC CGCACCGGTC CTAACGGCGC GATCCGCATC
GTCCCGGACG ATGAGTTGAC CCGTCGCGGC GACCGGGACT ACTTCCTGCA AGGCATCAAA
ATCGGGCCGA ACCAGATTCA CATCTCGCGC GTCGAACTCA ACAAGAAGGC CACCGGCCTG
GAACTTCCTC TGGTCCCGAC GCTGCGCACG GTCGCGCCGA TCCATCACCC CGATGGCGCG
CTGTTCGGCG TCATCGTCAT CAACGTCGAT CTGCGTCCGG CGATCGCGGA GATCCGCTCC
AGCGGCAAAC CCAGCGCGCT GGTCTACATG GTCAACGACG CCGGCGATTA CTTGGTGAAT
CCGGATCCCG CGAAGGAGTT TGGCTTCGAT CTCGGCAGGC GTTTTCGGAT CGGCGACGAT
TTCCCGGAAT TCGCCTCGGC GCTGCAACAA ACCGACGCTC GGCCGCGGGT GATGCAAGAC
CGCGACGGTC AGCGCTTCGG CGTTGGCTGG CAATGGGTGC GGCTTGCCGG CGGCCCGCGA
GTTGCCGTGA TCGAGGCCTT CCCCTACGGC ACGCTGATGA GCGTGCAGAC CGCCGTCAGC
AATTCGACGC TGATCGGCGG CGCCGCCGCG GTTCTTTGCG CCATCCTGAT GGCGGTGGGG
GTCGCGCGTT CGCTCACCAA GCCGCTGGTG CAGATCACCA AGGCCGTCGA GGGGTTTTCC
CGCGGCGAGA TGATTGCGAT CTCGGCGACC GGCGGCAACG AGATCGACGT ACTGGCCGGA
GCCTTCATCC GGATGACCGC GGAGTCGCAG CGCAAGACCG CTGAACTCAA CGAGGAGATC
GCCGAACGCA GCCGGATCGC CGAGGTGTTG AACAACACGC TCAACAACAT GGTCGATCCG
GTGCTGATCG CCGGCGCCGA CGGTCACGTC ATTCTCACCA ACTTCGCCGC GCGCAAGCTG
TTCGGCAATC CGACCGGGGT CGGCAATATG AACGCGGTGC GGACCTTCGA GCGATTCTAT
TCCGATGGCG TAACGCCGCT GCCGCCGCAG ATGTCGCCGC TGGTGCGGGC GTTCCGCGGC
GAGATCGTCG AGAACTTCGA ATTCGTTGCG CGGCCGTTGG CGTCCGCGCA CAAATCATAT
TTGGTCGCCA ACGGCCGCCC GATCCGCAGC GAGGCCGGGA TCCTGCAAGG CGCGGTGATG
GTCTATCACG ACGTCACTCA GACCAAGAAG GCGCAGGACG AATTGCGCGA AAGCGAGCGG
ATGGCGCGCG CGATCATCGA CACCGCACTC GACGCTTTCG TGCAGATCGA TCCCAGCGGG
GCGATCACCG AATGGAGCCC GCATGCCGAA ACGCTGTTCG GCTGGTCGCG CAACGAGGCG
CTGGGAGAGA ACATCGGCGT GCTGATCTTC TCACCCGATC AGACGAGCGA GACCAAGACG
AACTACCGCA AGTTCATCGA CTCGGTCGAT CACGGCGGCA CCGGCTATCG GATCGAGACC
GAGGCGACCC GCCGCGACGG CACCACGATC CAGATCGAGG TGGCGCTGAC CGCGCTGGTG
CGCAACGGCG GCCATGTGAC CAACGCCTTC ATGCGCGACC TCACGGAAAA GACCATCGCC
GAGCAGCAAT TGCGGCAAGC GCAGAAGATG GAATCGATCG GTCAATTGAC CGGCGGCATC
GCTCACGATT TCAACAACAT GCTGACCGTG ATCACCGGCA CCATCGACAT CCTGGGCGCC
GCGGTCGCCG ACCGTCCGGA ATGCGCGACG ATCACCAAGC TGATCTCCGA CGCCGCCGAC
CGCGGCGCGG AACTGACGCG CCATTTGCTG GCGTTCGCGC GCAAGCAGCC GCTGCAACCC
TGCGAGACCG ACCCCAACAC GCTGCTCAGC GACCTGCAGA ACCTGTTGCG GCCGACGCTC
GGCGAACAGA TCGAAATCTG CGAGGTGCTG CAGGACGGGG TGTGGCCGAT CTTCGTCGAT
CGCGGCCAGC TCGACGCCGC GCTGGTCAAT CTTGCGGTCA ACGCCCGCGA CGCCATGCCG
GACGGCGGCA CGCTGACGCT GGAGACCACC AATGTGGTGC TCGACGAGGA TTATGTTCGG
CGCTACGCCG AAGGCGAGCC GGGACCCTAC GTGATGATCA CGATCAGCGA TTCCGGCTGC
GGAATTCCGG AGGCGATCCG CGGCAGGGTG TTCGACCCGT TCTTCACCAC CAAAGAAGTC
GGCAAGGGCA CCGGGCTCGG GCTCAGCATG GTGTACGGCT TCATCAAGCA ATCCGGCGGC
CATATCACGC TGTACAGCGA AGTCGGGCAC GGCACCACGT TCCGCATCTA CCTGCCACGC
GCCAAGACCG AGCCGCAGTT GGTGGCGCCG TCGGTCAGCG AGGCGGTGGA GGTCGGCGGC
AACGAAACCA TCCTGATCGT CGAAGACGAC GCCATGGTTC GCAACTACGT CACCGCCCAG
CTCAAGGGGC TCGGCTACAC CACGCTGGCC GCACCCAACG CCGCGGCGGC GCTGGCGCTC
AGCGCCGAGG GCGCGTCGTT CGACCTCTTG TTCACCGATA TCGTGATGCC GGGCAAGATG
AACGGGGTGC AGCTCGCCGC CGAGATGGCG AAGCAGCATC CCTCGCTCAA GGTGTTGTAC
ACCTCCGGCT ATTCGGAGAA TGCGGTGATC CACAACAACC GGCTCGATCC CGATATCCTG
CTGCTCACCA AGCCGTATCG CCGCACCGCG TTGGCCCGCA TGGTCAGATT GGCGCTGAGC
GCGGCGACCG AACCGGAACG CCGACAGGCC TAG
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| Protein sequence | MKLSTRMALA MVALVSFTTI ALGLLTYHSV MTLILPRALD RLQTHARVTA MLLDASLRSA
RTDAAIAQTS GAAMMMHLRK QFGAAPDKIE SEWKEATAER FAAEMSGKPA YAQMRVIGVA
DGGMEIVRVD RTGPNGAIRI VPDDELTRRG DRDYFLQGIK IGPNQIHISR VELNKKATGL
ELPLVPTLRT VAPIHHPDGA LFGVIVINVD LRPAIAEIRS SGKPSALVYM VNDAGDYLVN
PDPAKEFGFD LGRRFRIGDD FPEFASALQQ TDARPRVMQD RDGQRFGVGW QWVRLAGGPR
VAVIEAFPYG TLMSVQTAVS NSTLIGGAAA VLCAILMAVG VARSLTKPLV QITKAVEGFS
RGEMIAISAT GGNEIDVLAG AFIRMTAESQ RKTAELNEEI AERSRIAEVL NNTLNNMVDP
VLIAGADGHV ILTNFAARKL FGNPTGVGNM NAVRTFERFY SDGVTPLPPQ MSPLVRAFRG
EIVENFEFVA RPLASAHKSY LVANGRPIRS EAGILQGAVM VYHDVTQTKK AQDELRESER
MARAIIDTAL DAFVQIDPSG AITEWSPHAE TLFGWSRNEA LGENIGVLIF SPDQTSETKT
NYRKFIDSVD HGGTGYRIET EATRRDGTTI QIEVALTALV RNGGHVTNAF MRDLTEKTIA
EQQLRQAQKM ESIGQLTGGI AHDFNNMLTV ITGTIDILGA AVADRPECAT ITKLISDAAD
RGAELTRHLL AFARKQPLQP CETDPNTLLS DLQNLLRPTL GEQIEICEVL QDGVWPIFVD
RGQLDAALVN LAVNARDAMP DGGTLTLETT NVVLDEDYVR RYAEGEPGPY VMITISDSGC
GIPEAIRGRV FDPFFTTKEV GKGTGLGLSM VYGFIKQSGG HITLYSEVGH GTTFRIYLPR
AKTEPQLVAP SVSEAVEVGG NETILIVEDD AMVRNYVTAQ LKGLGYTTLA APNAAAALAL
SAEGASFDLL FTDIVMPGKM NGVQLAAEMA KQHPSLKVLY TSGYSENAVI HNNRLDPDIL
LLTKPYRRTA LARMVRLALS AATEPERRQA
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