Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0490 |
Symbol | |
ID | 3970252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 529465 |
End bp | 530412 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637923606 |
Product | hypothetical protein |
Protein accession | YP_530384 |
Protein GI | 90422014 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.044481 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGTCAC AGCAACCGAG CGCGGGTCAA GCCGCGCGCC CGCTCAGCGT CGGCGCGATC GCGCTAGTTA TGTTGTGCTG CCTGTCCTGG GGCTTCAACC AGATCGCGAT CAAGCTGGTG CTACCGGAGG TTCCGCCGTT CCTGCAGGCG ACGATCCGCT CGCTCGGCGC GCTGCTGGTG ATCGGGCTGA TCGCGCAAGC CCGCGGCGTG AAGCTGTGGC AGCGCGACGG CGCCTGGCGC GCCGGGCTGT TCGCCGGCGT GCTGTTCGGC ATCGAATTCG TGCTGATCTA TCGCGGCCTG ATGCTGACCA CGGCGTCGCG CGCCGTGGTG TTTCTCTACA CCGCGCCGTT CTTCGTGGCG TTCGGCGCCT ACCAGCTGCT GCATGAGCGG CTGAACCGGC TGCAATGGGG CGGGCTGGCG CTGAGCTTCG TCGGCGTGGC GCTGGCGATC GGGGTGCCGC AGCCCAATGT CGATGCCGGC GTGCTGCTCG GCGATCTGAT GATGATCGGC GGCGGCGCGC TGTGGGCCGC CACCACGCTG ATCGTCAAGA CGACGCGGCT CGGCCGGGTG CCGGCGGAAA AGGGCCTCGG CTATCAGGTC GCGGTGTCGA TCCCGATCCT GGCGCTGGCG GCCTGGCTGT CCGGCGAAAC CGTGCCGCAA TGGCCCACGC CGCTGTCGCT GGCGCTGATG GCCTATCAGG CGGTCTGGGT GGTCGGGCTG ACCTTCCTGT TGTGGTTCGG CCTGGTGAAG ACCTATTCGG CCAGCAAATT GTCGTCCTTC ACCTTCATCA CCCCGCTGTT CGGCGTCGCC GCGGGTTATC TGATCATGGA CGATCCCTTG ACGCCGACCT TCGGCGTCGC CGCGCTCTTG GTGACCGCCG GGCTCTATCT GGTCAATCGG CCGGCACCGC GGGCCGAGCC GGCGGCTCGG CCCGACCGAA CGGCCTGA
|
Protein sequence | MPSQQPSAGQ AARPLSVGAI ALVMLCCLSW GFNQIAIKLV LPEVPPFLQA TIRSLGALLV IGLIAQARGV KLWQRDGAWR AGLFAGVLFG IEFVLIYRGL MLTTASRAVV FLYTAPFFVA FGAYQLLHER LNRLQWGGLA LSFVGVALAI GVPQPNVDAG VLLGDLMMIG GGALWAATTL IVKTTRLGRV PAEKGLGYQV AVSIPILALA AWLSGETVPQ WPTPLSLALM AYQAVWVVGL TFLLWFGLVK TYSASKLSSF TFITPLFGVA AGYLIMDDPL TPTFGVAALL VTAGLYLVNR PAPRAEPAAR PDRTA
|
| |