Gene RPC_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0320 
Symbol 
ID3971040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp341399 
End bp341806 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content70% 
IMG OID637923434 
Producthypothetical protein 
Protein accessionYP_530214 
Protein GI90421844 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA GTAGCGACGC GCGCTCGCCG GCGCCGCACG CGGCCGCGCC GGAGCGGGTG 
GCGGCGTTTC GCACCGGCAT CTCGGCCGAG GCCCGCGCCG CCGCCTATCT GATCGCCAAG
GGCTATCGCA TCGTGGCGCG GCGCTTTCGC ACGCCCTACG GCGAGATCGA CCTGGTGGCG
CGGCGGCGCA ATCTTCTGGC CTTCGTCGAA GTCAAAGCCC GCGCCAAGCT CGACGACGCC
GCCTATGCGG TGACGCCGCG TCAGCAACAA CGCATCATCG ACGCCGCGCA GGCCTGGCTG
ATGGCGCATC CCGAACACGC CGACTTTGAG CTGCGCTTCG ACGCCGTGCT GATCGCGCCG
AAATCTTTGC CTCGGCACCT GCCGGCGGCG TTCGACGCCA GCCCCTAA
 
Protein sequence
MAKSSDARSP APHAAAPERV AAFRTGISAE ARAAAYLIAK GYRIVARRFR TPYGEIDLVA 
RRRNLLAFVE VKARAKLDDA AYAVTPRQQQ RIIDAAQAWL MAHPEHADFE LRFDAVLIAP
KSLPRHLPAA FDASP