Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0254 |
Symbol | |
ID | 3971125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 266337 |
End bp | 267836 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923367 |
Product | Acetyl-CoA hydrolase |
Protein accession | YP_530148 |
Protein GI | 90421778 |
COG category | [C] Energy production and conversion |
COG ID | [COG0427] Acetyl-CoA hydrolase |
TIGRFAM ID | [TIGR03458] succinate CoA transferases |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.202355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.127915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGCC ATGATTCCCG GGTGATGTCT GCCGCGCTTC GCTCCAAGAT CATGTCCGCC GAAGACGCCG CAGCGCTGGT GAAGCACGGC GACAATGTCG GGATGAGCGG GTTTACCGGC TCCGGCTATC CCAAGGAGAT CCCGCTGGCG CTGGCGCGGC ATATCGAAGC CGCGCATGGC CGCGGCGAGC CGTTCCGCAT CGGGGTGTGG ACCGGCGCCT CCACCGCCCC CGAACTCGAC GGCGCGCTGG CCAAGGTCGA CGGCATCGAG CTGCGGCTGC CCTATCAGTC CGACCCGGTG ACCCGCGAAC GCATCAACGC CGGAACGATG GATTACATCG ACATCCATCT CAGCCACGTC GCGCAGTTCG TCTGGTTCGG CTTCCTCGGC CATCTCGACG TCGCGGTGGT CGAAGTCGCC GGAATCCTGC CCGACGGCAG CCTGGTGCCG ACCACCTCGG TCGGCAACAA CAAGACTTGG CTGGATCGCG CCGACCGCAT CATCCTCGAG GTCAATTCCT GGCACAATCC GGCGCTACAG GGCATGCACG ACATCTATTA CGGCACTCAA CTGCCGCCCT ACCGGCAGCC GATCCCGATC GTGACGCCGG GCGACCGCAT CGGCGAAACC ACCTTCCGCT GCGATACCAG CAAGGTGATC GCGGTGGTCG AAACCCACGC GCCGGATCGC AACAACACCT TCTCGCCGCC CGACCAAACC TCGCAGGCGA TCGCCGGGCA TATCCTGGAT TTCCTCGGTC ACGAGGTGCG CCGTGGCCGG CTGCCGCCGG AACTGCTGCC GCTGCAATCC GGCGTCGGCA ACGTCGCCAA TGCGGTGATG GCCGGGCTGG AGAGCGGCCC GTTCGAGCAG CTCACCGCCT ATACCGAGGT GCTGCAGGAC GGCATGCTCG ACCTGATCCG CTCCGGCAAG ATGACCTTCG CCTCCGCCAC CGCGCTGTCG TTCAGCGCCG AAAAGGCCGA GATCTTCAAT CGCGACACCG CCCAGCACAA AAACCGCGTG GTGCTGCGGC CGCAGGAGAT CTCCAACCAT CCGGAGGTGA TTCGACGGCT CGGGGTGATC TCGATGAACG GCATGATCGA GGCCGACATC TACGGCAACG TCAATTCCAC CCATATCCGC GGCAGCCGGA TCATGAACGG CATCGGCGGC TCCGGCGACT TCGCCCGCAA CGCCTATCTG TCGATCTTCA TGACGCCGTC GACCGCCAAG AACGGCACGC TGTCGTCGAT CGTGCCGATG GTCACCCATG TCGACCACAC CGAGCACGAC GTCCAGGTGC TGGTCACCGA GCAGGGCCTG GCCGATCTGC GCGGCCTGGC GCCGCGGCAA CGCGCCAAGG TGATCATCGA AAACACCGCG CATCCGAGCT TCAAGCCGGT GCTGCAGGAT TATTTCGACC GGGCGCGCCG CGGCTCCGCC GCCCAGCACA CCCCGCATCT GCTCGACGAG GCGTTGCGCG CGATCCATCC GGTGAGCTGA
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Protein sequence | MPSHDSRVMS AALRSKIMSA EDAAALVKHG DNVGMSGFTG SGYPKEIPLA LARHIEAAHG RGEPFRIGVW TGASTAPELD GALAKVDGIE LRLPYQSDPV TRERINAGTM DYIDIHLSHV AQFVWFGFLG HLDVAVVEVA GILPDGSLVP TTSVGNNKTW LDRADRIILE VNSWHNPALQ GMHDIYYGTQ LPPYRQPIPI VTPGDRIGET TFRCDTSKVI AVVETHAPDR NNTFSPPDQT SQAIAGHILD FLGHEVRRGR LPPELLPLQS GVGNVANAVM AGLESGPFEQ LTAYTEVLQD GMLDLIRSGK MTFASATALS FSAEKAEIFN RDTAQHKNRV VLRPQEISNH PEVIRRLGVI SMNGMIEADI YGNVNSTHIR GSRIMNGIGG SGDFARNAYL SIFMTPSTAK NGTLSSIVPM VTHVDHTEHD VQVLVTEQGL ADLRGLAPRQ RAKVIIENTA HPSFKPVLQD YFDRARRGSA AQHTPHLLDE ALRAIHPVS
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