| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0243 |
|---|
| Symbol | |
|---|
| ID | 3971153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 256685 |
|---|
| End bp | 257314 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637923356 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_530137 |
|---|
| Protein GI | 90421767 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.396094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.061558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCA TCACGGTCAG CGACGATCAG GCGACGCGCC GCGCCGGCAA GGCGATCCAG
CCGGCCTGGG TGCGGCTGCT GCACTGGATC AACGCCGCGG CGGTGATCAT GATGATCATG
TCGGGCTGGC AGATCTACAA CGCCTCGCCG CTGTTCGATT TCACCTTTTC GCGCAGCATC
ACGCTGGGCG GCTGGCTCGG CGGCGCGCTG CAGTGGCATT TTGCCGCGAT GTGGCTGCTG
ATGGTCAACG GCCTGGTCTA TCTGGCGCTC GGCGTCGCCA CCGGACGCTT CCGCGACAAA
TTGCTGCCGA TCACCCCCTC CGGCGTGTTG ACCGACACCA AGGCGGCGCT AACCGGACGA
TTGTCGCACG CCGACCTCAC CACCTACAAT TATGTGCAGC GGTTGCTCTA CCTCGGCATC
ATCGCGGTCG GCATCGTCAT CGTGCTGTCC GGGCTTTCGA TTTGGAAGCC GGTGCAGCTG
CAATGGCTGA CCGCGCTGTT CGGCGGCTAC GACGTCGCGC GCTACGTGCA CTTCGCCGCG
ATGGCGGCGA TCTGCGGGTT TCTGGTCATC CACGTCGCGC TGTCGTTGCT GGTGCCGAAA
GCGCTGCGCG CGATGATCAT CGGACGGTGA
|
|---|
| Protein sequence | MSSITVSDDQ ATRRAGKAIQ PAWVRLLHWI NAAAVIMMIM SGWQIYNASP LFDFTFSRSI
TLGGWLGGAL QWHFAAMWLL MVNGLVYLAL GVATGRFRDK LLPITPSGVL TDTKAALTGR
LSHADLTTYN YVQRLLYLGI IAVGIVIVLS GLSIWKPVQL QWLTALFGGY DVARYVHFAA
MAAICGFLVI HVALSLLVPK ALRAMIIGR
|
|---|
| |