| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0213 |
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| Symbol | |
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| ID | 3971162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 231543 |
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| End bp | 232265 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923326 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_530107 |
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| Protein GI | 90421737 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0138576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA GTCACCCTGA ACCAACGGCT ATGCCGGAAC TGACCGCGGA GGAGATCCTG
GCGCGGGTGC TGTACCGCGA CGGGCTGATG CTGGTGATCG ACAAGCCCGC CGGGCTGCCG
GTGCACCGCG GCCCGAAGGG CGGCGCCAAC CTAGAATCCT CGTTCGAGTT CCTGCGCTAC
GGGCTGCCGC GGCCGCCGGT GTTGGCGCAT CGGCTGGACC GCGACACCTC GGGCTGCCTG
GTGCTGGGGC GCCACCGCAA GGCCACCGCG TCGCTGGGGT TGTTGTTCAA GCACGGGCGG
ATTTCCAAGA CCTATTGGGC AGTGGTCGAA GGCGGCCCGA TCGAGGACGA AGGCACCATT
GAATTGCCGA TCGGCCGGCT CAACGCCGAG CGCGGCTGGT GGCAGAAGAT CGATCCGGAG
GGCCAGCCCG CCACCACCAA ATGGCGGGTG CTGGGCCGCG GCGACGGCCT CACCTGGCTG
GCGCTGCAGC CGGTGACCGG GCGGACGCAT CAGCTGCGGG TGCATAGCGC CGCGATGGGC
TGGCCGATCG TCGGCGACAA TATCTATGGC AACGGCCCGC GGTTCGGCGA ACCGACGCTG
CATCTGCACG CCAGCGAAAT CGTGATCCCA ATCTCGCGCA ACAAGCCGCC GATCGTGGTC
ACAGCACCAG CGCCGGTGCA TCTGCATGCG CGGCTGCGCG GGTGTGGGTG GAACGGGGAG
TAA
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| Protein sequence | MSESHPEPTA MPELTAEEIL ARVLYRDGLM LVIDKPAGLP VHRGPKGGAN LESSFEFLRY
GLPRPPVLAH RLDRDTSGCL VLGRHRKATA SLGLLFKHGR ISKTYWAVVE GGPIEDEGTI
ELPIGRLNAE RGWWQKIDPE GQPATTKWRV LGRGDGLTWL ALQPVTGRTH QLRVHSAAMG
WPIVGDNIYG NGPRFGEPTL HLHASEIVIP ISRNKPPIVV TAPAPVHLHA RLRGCGWNGE
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