Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0106 |
Symbol | |
ID | 3971326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 120849 |
End bp | 121889 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637923222 |
Product | (R)-2-hydroxyacid dehydrogenase |
Protein accession | YP_530004 |
Protein GI | 90421634 |
COG category | [C] Energy production and conversion |
COG ID | [COG2055] Malate/L-lactate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0971738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTCG AAGCCGAGCG CGTTCGCAGC TGCGCCGTCG ATGCGCTGAT GGCGGCGGGC GTGCTGCGGC AGGACGCCGA CCAGCAGGTC GATCTGCTGC TGGAAGCGGA GTTGCGCGGC CGGCCGTCGC ACGGTTTGCT GCGCCTGGCG CGCATTGTCG AGCGGATCGA CAACGGCGTG ATCGATCCGC GCGCCAGCGG CTGCCATCAC TGGAAGGCCG CGGGCTTTCT CGAGGTGGAC GGGCAGAACG GCCTCGGCCC GGTGGTCGCG CTCAGCGCGC TTGAGGCGAT CAGCCTGCGC GCCCGCGAGA CCGGGGTGGC GGTCGCAACA ATCGTCAACG CCAATCATCT CGGCATGCTG GCCTGGTACG CCGAGACGAT CGCGCGGCGC GGATTGACCA TCATCGCGCT GTCGATCAGC GAAGCGCTGG TGCATCCGTG GGGCGGCCGA CGCGCGATGC TCGGCACCAA TCCGGTGGCA ATCGGCGTGC CGGCCTCGCC GCGTCCCTTC GTGTTGGACA TGGCGAGCAG CCTGGTCTCG ATGGGACAAA TCCACGACCA CGCCAATCGC GGCGCGCCGA TCCCCGGCCA CTGGGCGCTG GATGCGCAAG GCAACGCCAC CACCGACGCC GCCGCGGCGA AGGCCGGTTC GATCGCGCCG TTCGGCGAGG CCAAGGGTTA TGCGCTCGGT CTCGCCTTCG AAGTGCTGGT CGCCAGCCTG ACCGGATCGG CGCTGGGCCG GCAGGTTCGC GGCACGCTGG ACTCCACTGA GGTCTGCAAC AAGGGCGACG TGTTCATCGT GATCGACGGA GCTTCGTCGG CGGCGATGGC GCAAGTGATC GGCGGCTATC TTGAGGCGAT TCGCGCCGAG CCGCCGGCCG ACGGCTTTGC GGCGGTGGCG ATCCCCGGCG ATCGCTCGAT CGCCGCGCGG CAGCGTGCGC TCGCCGATGG CATCAGCATC GCCGACCAGG TCTGGGCCGG CCTGGTTCGG CTGGCGCAAC GAAACCCAAA AAATCCCGCA GCAAAGGTCG CGCAATCATG A
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Protein sequence | MIVEAERVRS CAVDALMAAG VLRQDADQQV DLLLEAELRG RPSHGLLRLA RIVERIDNGV IDPRASGCHH WKAAGFLEVD GQNGLGPVVA LSALEAISLR ARETGVAVAT IVNANHLGML AWYAETIARR GLTIIALSIS EALVHPWGGR RAMLGTNPVA IGVPASPRPF VLDMASSLVS MGQIHDHANR GAPIPGHWAL DAQGNATTDA AAAKAGSIAP FGEAKGYALG LAFEVLVASL TGSALGRQVR GTLDSTEVCN KGDVFIVIDG ASSAAMAQVI GGYLEAIRAE PPADGFAAVA IPGDRSIAAR QRALADGISI ADQVWAGLVR LAQRNPKNPA AKVAQS
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